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Topic Review
Pterocarpus marsupium Roxb. (Fabaceae)
Trees are vital resources for economic, environmental, and industrial growth, supporting human life directly or indirectly through a wide variety of therapeutic compounds, commodities, and ecological services. Pterocarpus marsupium Roxb. (Fabaceae) is one of the most valuable multipurpose forest trees in India and Sri Lanka, as it is cultivated for quality wood as well as pharmaceutically bioactive compounds, especially from the stem bark and heartwood. However, propagation of the tree in natural conditions is difficult due to the low percentage of seed germination coupled with overexploitation of this species for its excellent multipurpose properties. This overexploitation has ultimately led to the inclusion of P. marsupium on the list of endangered plant species. However, recent developments in plant biotechnology may offer a solution to the overuse of such valuable species if such advances are accompanied by technology transfer in the developing world. Specifically, techniques in micropropagation, genetic manipulation, DNA barcoding, drug extraction, delivery, and targeting as well as standardization, are of substantial concern. To date, there are no comprehensive and detailed reviews of P. marsupium in terms of biotechnological research developments, specifically pharmacognosy, pharmacology, tissue culture, authentication of genuine species, and basic gene transfer studies.
  • 2.5K
  • 23 Feb 2022
Topic Review
Citrus Breeding 2.0 in Japan
Developing varieties with diverse features that satisfy varied commercial needs, improving overall fruit quality, and quickly releasing them, are prerequisites in citrus breeding. However, these three goals require trade-offs in conventional breeding, even with the application of the marker-assisted selection technique. Conventional breeding cannot achieve these three goals simultaneously and it has been regarded as a breeding trilemma. Integrating a genomics-assisted breeding (GAB) approach that relies on quantitative trait locus detection by genome-wide association study and genome-wide prediction of a trait by genomic selection using enriched marker genotypes enhances breeding efficiency and contributes to eliminating the trilemma. Besides these efforts, the analysis of the genealogy of indigenous citrus varieties revealed that many high-quality indigenous varieties were selected within a few generations. It suggested that selecting a new premium quality hybrid is possible by integrating it with the GAB technique and helps avoid the trilemma. Researchers describe an ongoing comprehensive approach for integrating genomic-assisted breeding (GAB) with citrus genealogy on citrus breeding, called Citrus Breeding 2.0. This method can develop new cultivars with premium quality in a short period.
  • 2.5K
  • 11 Aug 2022
Topic Review
Wheat genes lost in evolution
The modern cultivated wheat has passed a long evolution involving origin of wild emmer (WEM), development of cultivated emmer, formation of spelt wheat and finally establishment of modern bread wheat and durum wheat. During this evolutionary process, rapid alterations and sporadic changes in wheat genome took place, due to hybridization, polyploidization, domestication, and mutation. This has resulted in some modifications and a high level of gene loss. As a result, the modern cultivated wheat does not contain all genes of their progenitors. These lost genes are novel for modern wheat improvement.
  • 2.4K
  • 27 Oct 2020
Topic Review
Heavy Metals in Plants
The heavy metal cadmium (Cd), as one of the major environmentally toxic pollutants, has serious impacts on the growth, development, and physiological functions of plants and animals, leading to deterioration of environmental quality and threats to human health. 
  • 2.4K
  • 06 Aug 2021
Topic Review
Tithonia Diversifolia
Tithonia diversifolia　（Hemsl.） A. Gray　(Asteraceae) is native to Mexico and Central America. The species is spreading quickly and has naturalized in more than 70 countries. It has often been recorded as a harmful invasive plant which disturbs native plant communities. Phytotoxic chemical interactions such as allelopathy between invasive plants and native plants have been reported to play an important role in the invasion. Evidence for allelopathy of T. diversifolia has accumulated in the literature over 30 years. Thus, the objective of this review was to discuss the possible involvement of allelopathy in the invasive potential of T. diversifolia. The extracts, root exudates and plant residues of T. diversifolia inhibited the germination and growth of other plant species. The soil-water and soil collected from T. diversifolia fields also shown growth inhibitory effects. The decomposition rate of T. diversifolia residues in soil was reported to be high. Phytotoxic substances such as sesquiterpene lactones were isolated and identified in the extracts of T. diversifolia. Some of phytotoxic substances in T. diversifolia may be released into the soil through the decomposition of the plant residues and the exudation from living tissues of T. diversifolia including its root exudates, and act as allelopathic substances. Those allelopathic substances can inhibit the germination and growth of neighboring plants, and may enhance the competitive ability of the plants and make the plants invasive.
  • 2.4K
  • 27 Oct 2020
Topic Review
Pressure Flow Hypothesis
The Pressure Flow Hypothesis, also known as the Mass Flow Hypothesis, is the best-supported theory to explain the movement of sap through the phloem. It was proposed by Ernst Munch, a Germany plant physiologist in 1930. A high concentration of organic substances, particularly sugar, inside cells of the phloem at a source, such as a leaf, creates a diffusion gradient (osmotic gradient) that draws water into the cells from the adjacent xylem. This creates turgor pressure, also known as hydrostatic pressure, in the phloem. Movement of phloem sap occurs by bulk flow (mass flow) from sugar sources to sugar sinks. The movement in phloem is bidirectional, whereas, in xylem cells, it is unidirectional (upward). Because of this multi-directional flow, coupled with the fact that sap cannot move with ease between adjacent sieve-tubes, it is not unusual for sap in adjacent sieve-tubes to be flowing in opposite directions.
  • 2.4K
  • 09 Nov 2022
Topic Review
Anthocyanin Compositions in Carrots
Anthocyanins extracted from black carrots have received increased interest as natural colorants in recent years. The reason is mainly their high content of acylated anthocyanins that stabilizes the color and thereby increases the shelf-life of products colored with black carrot anthocyanins. Still, the main type of anthocyanins synthesized in all black carrot cultivars is cyanidin limiting their use as colorants due to the narrow color variation. Additionally, in order to be competitive against synthetic colors, a higher percentage of acylated anthocyanins and an increased anthocyanin content in black carrots are needed. However, along with the increased interest in black carrots there has also been an interest in identifying the structural and regulatory genes associated with anthocyanin biosynthesis in black carrots. Thus, huge progress in the identification of genes involved in anthocyanin biosynthesis has recently been achieved. Given this information it is now possible to attempt to modulate anthocyanin compositions in black carrots through genetic modifications.
  • 2.4K
  • 23 Mar 2021
Topic Review
Fe Uptake and Transport
The mode of iron (Fe) uptake and transport in cereal species is distinguished from that in other plant species by the synthesis and utilization of phytosiderophores, which are a group of Fe chelators involved in Fe mobilization from the environment as well as within the plant body. In this entry, the overview of the molecular mechanisms behind the Fe uptake and transport is presented, highlighting the commonality and diversity among cereal species.
  • 2.4K
  • 29 Oct 2020
Topic Review
Halophyte Common Ice Plants
The problems associated with the salinization of soils and water bodies and the increasing competition for scarce freshwater resources are increasing. Current attempts to adapt to these conditions through sustainable agriculture involves searching for new highly salt-tolerant crops, and wild species that have potential as saline crops are particularly suitable. The common ice plant (Mesembryanthemum crystallinum L.) is an edible halophyte member of the Aizoaceae family, which switches from C3 photosynthesis to crassulacean acid metabolism (CAM) when exposed to salinity or water stress. The aim of this review was to examine the potential of using the ice plant in both the wild and as a crop, and to describe its ecology and morphology, environmental and agronomic requirements, and physiology. The antioxidant properties and mineral composition of the ice plant are also beneficial to human health and have been extensively examined.
  • 2.4K
  • 13 Oct 2021
Topic Review
Flavonoids and Isoflavonoids Biosynthesis
Phenylpropanoid metabolism represents an important metabolic pathway from which originates a wide number of secondary metabolites derived from phenylalanine or tyrosine, such as flavonoids and isoflavonoids, crucial molecules in plants implicated in a large number of biological processes. Therefore, various types of interconnection exist between different aspects of nitrogen metabolism and the biosynthesis of these compounds. For legumes, flavonoids and isoflavonoids are postulated to play pivotal roles in adaptation to their biological environments, both as defensive compounds (phytoalexins) and as chemical signals in symbiotic nitrogen fixation with rhizobia. In this paper, we summarize the recent progress made in the characterization of flavonoid and isoflavonoid biosynthetic pathways in the model legume Lotus japonicus (Regel) Larsen under different abiotic stress situations, such as drought, the impairment of photorespiration and UV-B irradiation. Emphasis is placed on results obtained using photorespiratory mutants deficient in glutamine synthetase. The results provide different types of evidence showing that an enhancement of isoflavonoid compared to standard flavonol metabolism frequently occurs in Lotus under abiotic stress conditions. The advance produced in the analysis of isoflavonoid regulatory proteins by the use of co-expression networks, particularly MYB transcription factors, is also described. The results obtained in Lotus japonicus plants can be also extrapolated to other cultivated legume species, such as soybean, of extraordinary agronomic importance with a high impact in feeding, oil production and human health.
  • 2.4K
  • 20 Aug 2020
Topic Review
Neurological Effects of Kratom
Kratom (Mitragyna speciosa Korth. Havil) has been considered a narcotic drug for years, barred by the law in many parts of the world, while extensive research over the past few decades proves its several beneficial effects, some of which are still in ambiguity. In many countries, including Thailand, the indiscriminate use and abuse of kratom have led to the loss of life. Nonetheless, researchers have isolated almost fifty pure compounds from kratom, most of which are alkaloids. The most prevalent compounds, mitragynine and 7-hydroxy mitragynine, are reported to display agonist morphine-like effects on human μ-opioid receptors and antagonists at κ- and δ-opioid receptors with multimodal effects at other central receptors.
  • 2.4K
  • 20 Nov 2023
Topic Review
Silphium
The chemical composition of three Silphium species in the aspect of the possibility of their use for various purposes has been evaluated. The plant material of three Silphium species (S. perfoliatum, S. trifoliatum and S. integrifolium) was acquired from cultivation located in eastern Poland. The vegetative propagating material consisted of seeds and rhizomes. Content of protein (up to 22.9% in leaves of S. perfoliatum), amino acids (aspartic acid—up to 12.0%, glutamic acid—up to 9.5%, and leucine—up to 9.4%), fat (up to 4.2% in inflorescences of S. perfoliatum), cellulose (up to 42.9% in stems of S. trifoliatum), water-soluble sugars (up to 26.7% in rhizomes of S. perfoliatum) and mineral substances (ash up to 20.9% in stems of S. integrifolium, with significant levels of elements such as K, Ca, Mg, Fe, Mn) in the tested Silphium species can be an important criterion determining a positive evaluation of these plants as sources of alternative raw materials. The conducted research is meant to draw attention to the possibility of use of the biomass of three Silphium species as a potential source of ecological and renewable raw material for food, pharmaceuticals, feed and possibly also for energy generation purposes.
  • 2.4K
  • 02 Nov 2020
Topic Review
The Leafless Vanilla Species
The pantropical genus Vanilla is a member of the Orchidaceae family. It originated in America and differentiated in America, Africa, and Asia. About 132 species of Vanilla have now been accepted since the discovery of the genus. Within the Vanilla genus, leaflessness has appeared at least three independent times, in Africa, Asia, and America as an adaptation to drought conditions. The South-West Indian Ocean (SWIO) region is home to seven leafless species. Chloroplast markers failed to differentiate species within this recent SWIO clade. Morphological traits used for description are very similar between species and do not provide reliable identification. Leafless Vanilla species from the SWIO islands are thus an excellent model for understanding the evolution of orchids. For their conservation, and to confirm the identity of these leafless species, an integrated approach with classical taxonomy using a large number of samples, intense fieldwork on biology and ecology, and molecular studies using variable markers is necessary.
  • 2.4K
  • 14 Dec 2020
Topic Review
Description and Phytoconstituents of Sapindus mukorossi Gaertn.
Sapindus mukorossi Gaertn., also called the washnut, is a tropical tree of the Sapindaceae family. The plant owes its name to its cleaning and washing properties used by the local population as a natural detergent. The most important ingredients of the plant are triterpenoid saponins contained in many parts of the plant, inducing fruits, galls, or roots. The tree also contains other valuable, biologically active compounds that are obtained by extraction methods. Raw or purified extract and isolated saponins are valuable plant products that can be used in the food, pharmaceutical, cosmetic, and chemical industries.
  • 2.4K
  • 20 Sep 2022
Topic Review
Biological Activity of Cinnamomum Camphora Essential Oils
Camphor tree (Cinnamomum camphora) is an ornamental plant that has been cultivated for a long time to obtain wood or camphor. Furthermore, its essential oil can be used as an alternative medicine and is an important source of perfume. Camphor obtained from camphor trees has long been used as a treatment for various symptoms such as inflammation, infection, congestion, muscle pain, and irritation in various regions. Despite many studies focused on the essential oil of the camphor tree, there is a lack of systematic studies of its extraction or separation. Besides, various components of camphor are not fully understood, and further research is needed on the medicinal effects of individual components of C. camphor. The genus Cinnamomum has crucial economic value and theoretical significance.
  • 2.4K
  • 28 Jun 2022
Topic Review Peer Reviewed
Bioactive Compounds from Eruca sativa Seeds
Eruca sativa Miller (Brassicaceae) is an insect-pollinated diploid annual species which grows spontaneously in the entire Mediterranean basin from semi-arid to arid-hot conditions and is cultivated in Northern America, Europe, and Asia as either salad or oilseed crop. Here, some essential background was provided on this versatile crop, summarizing the present status of Eruca sativa research focusing on the wealth of bioactive ingredients in its seeds, which may find exploitation in agriculture, in the food industries and as nutraceuticals for their antioxidant and anti-inflammatory properties. Fatty acids of Eruca sativa seed oil, gums, glucosinolates and soluble and insoluble phenol and flavonoid fractions in the defatted press cake are the main bioactive compounds considered to date by the scientific literature and that deserve attention for their physical and biological activities. 
  • 2.4K
  • 13 Mar 2025
Topic Review
Asteraceae
Recent studies show that searching for new possibilities of phytotherapy using compounds isolated from Centaureinae plants is worth the effort. Treatment based on active substances from plants of the Centaureinae subtribe is often effective and does not cause side effects, as was demonstrated on an example of antifungal infections and SD and melasma and lentigo solaris treatment.
  • 2.4K
  • 09 Dec 2020
Topic Review
Miscanthus Giganteus
Miscanthus × giganteus, the giant miscanthus, is a sterile hybrid of Miscanthus sinensis and Miscanthus sacchariflorus. It is a perennial grass with bamboo-like stems that can grow to heights of more than 4 metres (13 ft) in one season (from the third season onwards). Just like Pennisetum purpureum, Arundo donax and Saccharum ravennae, it is also called elephant grass. Miscanthus × giganteus' perennial nature, its ability to grow on marginal land, its water efficiency, non-invasiveness, low fertilizer needs, significant carbon sequestration and high yield have sparked a lot of interest among researchers, with some arguing that it has "ideal" energy crop properties. Some argue that it can provide negative emissions, while others highlight its water cleaning and soil enhancing qualities. There are practical and economic challenges related to its use in the existing, fossil based combustion infrastructure, however. Torrefaction and other fuel upgrading techniques are being explored as countermeasures to this problem.
  • 2.4K
  • 03 Nov 2022
Topic Review
DOF Transcription Factors in Seed
The DOF (DNA BINDING WITH ONE FINGER) family of plant-specific TF (transcription factors) was first identified in maize in 1995. Since then, DOF proteins have been shown to be present in the whole plant kingdom, including the unicellular alga Chlamydomonas reinhardtii. The DOF TF family is characterised by a highly conserved DNA binding domain (DOF domain), consisting of a CX2C-X21-CX2C motif, which is able to form a zinc finger structure. Early in the study of DOF proteins, their relevance for seed biology became clear. Indeed, the PBF (PROLAMIN BINDING FACTOR), one of the first DOF proteins characterised, controls the endosperm-specific expression of the zein genes in maize. Subsequently, several DOF proteins from both monocots and dicots have been shown to be primarily involved in seed development, dormancy and germination, as well as in seedling development and other light-mediated processes. In the last two decades, the molecular network underlying these processes have been outlined, and the main molecular players and their interactions have been identified. In this review, we will focus on the DOF TFs involved in these molecular networks, and on their interaction with other proteins.  
  • 2.4K
  • 28 Oct 2020
Topic Review
Dolomite Phenomenon
The so-called dolomite phenomenon, also known as dolomite edaphism or dolomitophily, occurs globally and is evidenced through the appearance of an endemic flora on nutrient-poor soils with high levels of magnesium. It occurs when dolomitic rocks emerge, especially with high Mg content, and when tectonic or weathering processes generate skeletal soils, predominantly sandy or gravelly in texture. These types of habitats are associated with a specific flora, also accompanied by other tolerant species.
  • 2.4K
  • 02 Feb 2021
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