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Topic Review
Pharmacological Activities of Galactomannan Derivatives
Galactomannans are versatile macromolecules with broad industrial potential. The influence of changes in the chemical structures and respective bioactivities of these polysaccharides have been extensively studied. The derivatives obtained by sulfation, complexation, and phosphorylation are the most studied biological properties in galactomannans. The derivatives obtained have shown several pharmacological activities such as antiviral, antimicrobial, anticoagulant, fibrinolytic, chemopreventive, anticancer, antioxidant, chondroprotective, analgesic, immunomodulatory, and antileishmanial. 
  • 1.6K
  • 24 Feb 2021
Topic Review
Thermophilic Nucleic Acid Polymerases
Nucleic acid polymerases are enzymes that catalyze DNA or RNA synthesis, including DNA polymerases (DNAPs), RNA polymerases (RNAPs), reverse transcriptases (RTs), and RNA-dependent RNA polymerases (RdRps), which play central roles in the storage and transmission of genetic information in living organisms, and have been widely applied in molecular biology and biotechnology. Their unique activities and functions have laid the foundation of many broadly used or modern techniques, including polymerase chain reaction (PCR), DNA sequencing, and DNA information storage. Thermostability is a desired property of nucleic acid polymerases for many of their applications, especially those involving thermocycling.
  • 1.6K
  • 09 Dec 2022
Topic Review
Porphyrins/Chlorins for Viruses Inactivation
The problem of treating viral infections is extremely important both in connection with the emergence of new viral diseases and in connection with the low efficiency of existing approaches to the treatment of known viral infections. This entry is devoted to the use of porphyrins, chlorins, and phthalocyanines for the fight against viral infections using chemical and photochemical inactivation methods. The purpose of this work is to summarize the main approaches developed to date to chemical and photodynamic inactivation of human and animal viruses using porphyrins and their analogs, as well as to analyze and discuss information on viral targets and antiviral activity of porphyrins, chlorins and their derivatives obtained in the last 10-15 years, in order to identify the most promising areas.
  • 1.6K
  • 23 Jun 2021
Topic Review
Computational NMR of Carbohydrates
Nowadays, computational NMR is widely used for structural and stereochemical studies of a wide series of carbohydrates including mono-, di-, and polysaccharides together with their functional derivatives. Stereochemical analysis of carbohydrates could mostly be performed by using computational versus experimental 1H and 13C-NMR chemical shifts and spin-spin coupling constants in view of their marked stereochemical dependences providing a new guide in stereochemical structure of carbohydrates together with fundamental factors controlling molecular recognition and catalysis in biochemical systems.
  • 1.6K
  • 05 May 2021
Topic Review
Macrophage Polarization States
The M1/M2 macrophage paradigm plays a key role in tumor progression. M1 macrophages are historically regarded as anti-tumor, while M2-polarized macrophages, commonly deemed tumor-associated macrophages (TAMs), are contributors to many pro-tumorigenic outcomes in cancer through angiogenic and lymphangiogenic regulation, immune suppression, hypoxia induction, tumor cell proliferation, and metastasis.
  • 1.6K
  • 21 Jul 2021
Topic Review
UFM1
Post-translational modification with Ubiquitin-like proteins represents a complex signaling language regulating virtually every cellular process. Among these post-translational modifiers is Ubiquitin-fold modifier (UFM1), which is covalently attached to its substrates through the orchestrated action of a dedicated enzymatic cascade. Originally identified to be involved embryonic development, its biological function remains enigmatic. Recent research reveals that UFM1 regulates a variety of cellular events ranging from DNA repair to autophagy and ER stress response implicating its involvement in a variety of diseases. Given the contribution of UFM1 to numerous pathologies, the enzymes of the UFM1 cascade represent attractive targets for pharmacological inhibition.
  • 1.6K
  • 26 Feb 2021
Topic Review
Angiotensin II
Cardiovascular disease is the leading cause of morbidity and mortality in the western and developing world, and the incidence of cardiovascular disease is increasing with the longer lifespan afforded by our modern lifestyle.  Vascular diseases including coronary heart disease, high blood pressure, and stroke comprise the majority of cardiovascular disease and therefore represent a significant medical and socioeconomic burden on our society.  It is not be surprising that these conditions overlap and potentiate each other when we consider the many cellular and molecular similarities between them. At the molecular level, the vascular smooth muscle cell (VSMC) is the target, integrator, and effector cell of both atherogenic and the major effector protein of the hypertensive signal, Angiotensin II (Ang II).  Together, these signals can potentiate each other and prime the artery and exacerbate hypertension and atherosclerosis. Therefore, VSMC are the fulcrum in progression of these diseases and therefore, understanding the effects of atherogenic stimuli and Ang II on VSMC is  key to understanding and treating  atherosclerosis and hypertension.  In this review, we will examine studies in which hypertension and atherosclerosis intersect on the VSMC, and illustrate common pathways between these two diseases and vascular aging.
  • 1.6K
  • 07 Jul 2020
Topic Review
The Physiological and Pathological Role of Acyl-CoA Oxidation
Fatty acid metabolism, including β-oxidation (βOX), plays an important role in human physiology and pathology. βOX is an essential process in the energy metabolism of most human cells. Moreover, βOX is also the source of acetyl-CoA, the substrate for (a) ketone bodies synthesis, (b) cholesterol synthesis, (c) phase II detoxication, (d) protein acetylation, and (d) the synthesis of many other compounds, including N-acetylglutamate—an important regulator of urea synthesis. 
  • 1.6K
  • 20 Oct 2023
Topic Review
Arabidopsis RETICULON-LIKE4 (RTNLB4)
Agrobacterium tumefaciens genetically transforms plant cells by transferring the transfer-DNA (T-DNA) and virulence (Vir) proteins from bacteria via a VirB-encoded type IV secretion system into plants. The effectors manipulate plant proteins to assist in T-DNA transfer, integration, and expression in plant cells. The Arabidopsis reticulon-like (RTNLB) proteins are located in the endoplasmic reticulum and are involved in endomembrane trafficking in plant cells. We functionally characterized reticulon-like protein B4 (RTNLB4), which interacted with the A. tumefaciens VirB2 protein, a major component of A. tumefaciens T-pilus. Overexpression or knockdown of RTNLB4 affected the expression of A. tumefaciens elf18 peptide-induced plant defense-related genes and could affect Agrobacterium-mediated transformation rates. Pre-treatment with elf18 peptide decreased Agrobacterium-mediated transient expression efficiency more in wild-type seedlings than RTNLB4 O/E transgenic plants, which suggests that the induced defense responses in RTNLB4 O/E transgenic plants might be affected after bacterial elicitor treatments. We also showed that two VirB2 peptides induced the expression of defense-related genes and H2O2 production and inhibited seedling growth. These typical pathogen-associated molecular pattern-trigged immune responses were less induced in RTNLB4 overexpression transgenic plants. Our findings provide strong evidence that RTNLB4 has major roles in the A. tumefaciens elf18 and VirB2 peptide-derived plant defense responses. We believe this study advances our understanding of possible functions of the RTNLB4 protein in the A. tumefaciens infection process and plant immunity.
  • 1.6K
  • 01 Nov 2020
Topic Review
Spermine in Prostate Cancer
Spermine, a member of polyamines, exists in all organisms and is essential for normal cell growth and function. It is highly expressed in the prostate compared with other organs and is detectable in urine, tissue, expressed prostatic secretions, and erythrocyte. A significant reduction of spermine level was observed in prostate cancer (PCa) tissue compared with benign prostate tissue, and the level of urinary spermine was also significantly lower in men with PCa. Decreased spermine level may be used as an indicator of malignant phenotype transformation from normal to malignant tissue in prostate.
  • 1.6K
  • 25 May 2021
Topic Review
CeRNA Networks in Neurodegenerative Diseases
Protein aggregation is classically considered the main cause of neuronal death in neurodegenerative diseases (NDDs). However, increasing evidence suggests that alteration of RNA metabolism is a key factor in the etiopathogenesis of these complex disorders. Non-coding RNAs are the major contributor to the human transcriptome and are particularly abundant in the central nervous system, where they have been proposed to be involved in the onset and development of NDDs. Interestingly, some ncRNAs (such as lncRNAs, circRNAs and pseudogenes) share a common functionality in their ability to regulate gene expression by modulating miRNAs in a phenomenon known as the competing endogenous RNA mechanism. Moreover, ncRNAs are found in body fluids where their presence and concentration could serve as potential non-invasive biomarkers of NDDs.
  • 1.5K
  • 17 Feb 2021
Topic Review
γ-Hydroxybutyric Acid
γ-Hydroxybutyric acid (GHB) is an endogenous short chain fatty acid that acts as a neurotransmitter and neuromodulator in the mammalian brain. It has often been illegally abused or misused due to its strong anesthetic effect, particularly in drug-facilitated crimes worldwide. However, proving its ingestion is not straightforward because of the difficulty in distinguishing between endogenous and exogenous GHB, as well as its rapid metabolism. Metabolomics and metabolism studies have recently been used to identify potential biomarkers of GHB exposure. 
  • 1.5K
  • 04 Mar 2021
Topic Review
Terpenoid Lactones
Terpenoids with lactone moieties have been indicated to possess various biological activities. Certain terpenoid lactones exist in nature, in plants and animals, but they can also be obtained by chemical synthesis. Terpenoids possessing lactone moieties are known for their cytotoxic, anti-inflammatory, antimicrobial, anticancer, and antimalarial activities. 
  • 1.5K
  • 31 May 2021
Topic Review
Forkhead Box Protein O1 (FOXO1)
Forkhead box protein O1 (FOXO1) also known as forkhead in rhabdomyosarcoma (FKHR) is a protein that in humans is encoded by the FOXO1 gene. FOXO1 is a transcription factor that plays important roles in regulation of gluconeogenesis and glycogenolysis by insulin signaling, and is also central to the decision for a preadipocyte to commit to adipogenesis. It is primarily regulated through phosphorylation on multiple residues; its transcriptional activity is dependent on its phosphorylation state.
  • 1.5K
  • 30 Nov 2022
Topic Review
Brillouin Spectroscopy
Brillouin spectroscopy has recently gained considerable interest within the biomedical field as an innovative tool to study mechanical properties in biology. The Brillouin effect is based on the inelastic scattering of photons caused by their interaction with thermodynamically driven acoustic modes or phonons and it is highly dependent on the material’s elasticity. Therefore, Brillouin is a contactless, label-free optic approach to elastic and viscoelastic analysis that has enabled unprecedented analysis of ex vivo and in vivo mechanical behavior of several tissues with a micrometric resolution, paving the way to a promising future in clinical diagnosis.
  • 1.5K
  • 20 Aug 2021
Topic Review
Legionella
Legionella are Gram-stain-negative rods associated with water environments: either natural or man-made systems. The inhalation of aerosols containing Legionella bacteria leads to the development of a severe pneumonia termed Legionnaires’ disease.
  • 1.5K
  • 20 Oct 2021
Topic Review
MERTK and AXL in NSCLC
MERTK and AXL are members of the TAM family of receptor tyrosine kinases and are abnormally expressed in 69% and 93% of non-small cell lung cancers (NSCLCs), respectively. Expression of MERTK and/or AXL provides a survival advantage for NSCLC cells and correlates with lymph node metastasis, drug resistance, and disease progression in patients with NSCLC. The TAM receptors on host tumor infiltrating cells also play important roles in the immunosuppressive tumor microenvironment. Thus, MERTK and AXL are attractive biologic targets for NSCLC treatment. 
  • 1.5K
  • 29 Mar 2022
Topic Review
Cell Cycle Checkpoints
Studies have shown that during early embryogenesis, preimplantation embryos exhibit higher levels of chromosomal abnormalities in the initial stages of cleavage compared to the late morula stage or blastocysts. Thus, preimplantation embryos can acquire an aneuploidy phenotype already in early developmental stages, which points to the fact that these first mitotic cycles are more susceptible to chromosomal aberrations. The monitoring of chromatin damage, the so-called cell cycle checkpoint, is therefore an essential aspect of the cell cycle.
  • 1.5K
  • 12 May 2023
Topic Review
Antibacterial Secondary Metabolites from Basidiomycetes
Fungi are a rich source of secondary metabolites with several pharmacological activities such as antifungal, antioxidant, antibacterial and anticancer to name a few. Due to the large number of diverse structured chemical compounds they produce, fungi from the phyla Ascomycota, Basidiomycota and Muccoromycota have been intensively studied for isolation of bioactive compounds. Basidiomycetes-derived secondary metabolites are known as a promising source of antibacterial compounds with activity against Gram-positive bacteria. The continued emergence of antimicrobial resistance (AMR) poses a major challenge to patient health as it leads to higher morbidity and mortality, higher hospital-stay duration and substantial economic burden in global healthcare sector. One of the key culprits for AMR crisis is Staphylococcus aureus causing community-acquired infections as the pathogen develops resistance towards multiple antibiotics. The recent emergence of community strains of S. aureus harbouring methicillin-resistant (MRSA), vancomycin-intermediate (VISA) and vancomycin-resistant (VRSA) genes associated with increased virulence is challenging. Despite the few significant developments in antibiotic research, successful MRSA therapeutic options are still needed to reduce the use of scanty and expensive second-line treatments. This paper provides an overview of findings from various studies on antibacterial secondary metabolites from basidiomycetes, with a special focus on antistaphylococcal activity.
  • 1.5K
  • 20 Aug 2021
Topic Review
Ceramide Metabolism and Parkinson’s Disease
Ceramide is a bioactive sphingolipid involved in numerous cellular processes. In addition to being the precursor of complex sphingolipids, ceramides can act as second messengers, especially when they are generated at the plasma membrane of cells. Its metabolic dysfunction may lead to or be a consequence of an underlying disease. Recent reports on transcriptomics and electrospray ionization mass spectrometry analysis have demonstrated the variation of specific levels of sphingolipids and enzymes involved in their metabolism in different neurodegenerative diseases. In the present review, we highlight the most relevant discoveries related to ceramide and neurodegeneration, with a special focus on Parkinson's disease. 
  • 1.5K
  • 30 Jun 2021
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