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Topic Review
Panorama of Breakthrough Infection Caused by SARS-CoV-2
Since the outbreak of the novel coronavirus disease 2019 (COVID-19) in 2019, many countries have successively developed a variety of vaccines against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). However, with the continuous spread of SARS-CoV-2, it has evolved several variants; as a result, prevention and control of the pandemic of SARS-CoV-2 has become more important. Among these variants, the Omicron variant has higher transmissibility and immune escape ability and is the main variant causing a large number of COVID-19 breakthrough infection, thus, presenting new challenges to pandemic prevention and control.
  • 773
  • 08 Dec 2022
Topic Review
Prevalence of Vancomycin-Resistant Enterococcus in Poultry in Malaysia
Enterococcus has emerged as a significant nosocomial and community-acquired pathogen as a result of its ability to develop resistance to antimicrobials, particularly vancomycin. Vancomycin is the final treatment option, particularly for Enterococcus. There is abundant proof that drug-resistant bacteria exist in poultry and can be transmitted to humans. Regular monitoring of vancomycin-resistant Enterococcus (VRE) in poultry would aid policymakers in developing effective control measures and design antimicrobial resistance (AMR) surveillance capacity building in Malaysia. Further, livestock farmers should be educated on antibiotics resistance and trained on responsible utilization of antibiotics.
  • 772
  • 16 Feb 2022
Topic Review
SARS-CoV-2 Vaccine Willingness
As pregnant women are at high risk of severe SARS-CoV-2 infection and COVID-19 vaccines are available in Switzerland, this study aimed to assess the willingness of Swiss pregnant and breastfeeding women to become vaccinated. Through a cross-sectional online study conducted after the first pandemic wave, vaccination practices and willingness to become vaccinated against SARS-CoV-2 if a vaccine was available were evaluated through binary, multi-choice, and open-ended questions.
  • 771
  • 04 Aug 2021
Topic Review
Autophagy in Virus Infection
Virus-infected cells trigger a robust innate immune response and facilitate virus replication. Autophagy is a cellular degradation pathway operated at the basal level to maintain homeostasis and is induced by external stimuli for specific functions. The degradative function of autophagy is considered a cellular anti-viral immune response. However, autophagy is a double-edged sword in viral infection; viruses often benefit from it, and the infected cells can also use it to inhibit viral replication. In addition to viral regulation, autophagy pathway proteins also function in autophagy-independent manners to regulate immune responses. Since viruses have co-evolved with hosts, they have developed ways to evade the anti-viral autophagic responses of the cells. 
  • 771
  • 17 Mar 2022
Topic Review
Role of the Gut–Lung Axis in RTIs
Respiratory tract infections (RTIs) are a major cause of morbidity and mortality worldwide. These infections can range from mild upper respiratory tract infections to severe and life-threatening pneumonia. A plethora of studies have described the relationship between gut microbiota (GM) composition and function and the development of various human diseases, focusing especially on the role of GM in regulating the immune system. Although the underlying mechanisms are not yet fully understood, there is mounting evidence that GM can modulate the immune function in distant mucosal sites such as the respiratory system, and therefore play a role in the development of RTIs.
  • 770
  • 02 Aug 2022
Topic Review
Escherichia coli Antimicrobial Resistance in Humans
To date, the scientific literature on health variables for Escherichia coli antimicrobial resistance (AMR) has been investigated throughout several systematic reviews, often with a focus on only one aspect of the One Health variables: human, animal, or environment.
  • 770
  • 03 Jan 2024
Topic Review
Japanese Encephalitis Virus Clinical Features in Humans
Japanese encephalitis virus (JEV), a zoonotic flavivirus, is principally transmitted by hematophagous mosquitoes, continually between susceptible animals and incidentally from those animals to humans.
  • 767
  • 05 Jun 2023
Topic Review
Treatment of Opisthorchis viverrini
Opisthorchiasis due to Opisthorchis viverrini infection continues to be a significant public healthcare concern in various subregions of Southeast Asia, particularly in Thailand, Laos, Cambodia, Myanmar, and Vietnam. The mainstay of treatment of opisthorchiasis is praziquantel, while treatment of opisthorchiasis-associated cholangiocarcinoma depends on its anatomic subtype and resectability.
  • 767
  • 12 Jun 2023
Topic Review
HBV Infection in HIV-1 Infected Individuals
Disease progression and liver-related complications are more common in HIV-1/HBV co-infected than HBV mono-infected individuals. Response to HBV vaccine is suboptimal in HIV-1-infected individuals. Several factors affect HBV vaccine response during HIV-1 infection including CD4+ T cell counts, B cell response, vaccine formulation, schedules, and timing of antiretroviral therapy (ART). Thus, regular follow-up for antibody titer and a booster dose is warranted to prevent HBV transmission in HIV-1 infected people.
  • 765
  • 31 Dec 2021
Topic Review
Invasive Pulmonary Aspergillosis
Invasive pulmonary aspergillosis is growing in incidence, as patients at risk are growing in diversity. Outside the classical context of neutropenia, new risk factors are emerging or newly identified, such as new anticancer drugs, viral pneumonias and hepatic dysfunctions. Clinical signs remain unspecific in these populations and the diagnostic work-up has considerably expanded. Computed tomography is key to assess the pulmonary lesions of aspergillosis, whose various features must be acknowledged. Positron-emission tomography can bring additional information for diagnosis and follow-up in specific cases. The mycological argument for diagnosis is rarely fully conclusive, as biopsy from a sterile site is challenging in most clinical contexts. In patients with a risk and suggestive radiological findings, probable invasive aspergillosis is diagnosed through blood and bronchoalveolar lavage fluid samples by detecting galactomannan or DNA, or by direct microscopy and culture for the latter. Diagnosis is considered as a possible invasive mold disease in lack of mycological criterion. 
  • 764
  • 27 Feb 2023
Topic Review
Convalescent Plasma Transfusion for COVID‐19
More than one year into the novel coronavirus disease 2019 (COVID-19) pandemic, healthcare systems across the world continue to be overwhelmed with soaring daily cases. The treatment spectrum primarily includes ventilation support augmented with repurposed drugs and/or convalescent plasma transfusion (CPT) from recovered COVID-19 patients. CPT is a promising COVID-19 therapeutic option that merits internationally coordinated RCTs to achieve a scientific risk-benefit consensus. 
  • 763
  • 24 May 2021
Topic Review
Lung Microbiome in Critically Ill Patients
The microbiome is a diverse ecosystem that includes all host-associated microorganisms and their genomes. These microorganisms belong to various kingdoms including some potential pathogens such as bacteria, viruses and fungi. To obtain a comprehensive view of the lung microbiome, including not only bacterial but also viral and fungal data, is of great value to improve our understanding of critical lung illnesses such as VAP or ARDS. The evolution of the lung microbiome over time and the description of its dysbiosis will be key elements to improve diagnosis and preventive measures in ventilated patients.
  • 763
  • 24 Jan 2022
Biography
Honggguang Nie
Hongguang Nie, female, professor and doctoral supervisor of the Stem Cells and Regenerative Medicine, College of Basic Medical Science, China Medical University. Chairman of the Professional Committee of Tissue Engineering and Regenerative medicine, Liaoning Society of Cell Biology; Committee Member of the Stem Cell and Immunology Professional Committee of Liaoning Immunological Society; High le
  • 763
  • 18 Apr 2023
Topic Review
Antioxidant Phytochemicals in HIV+ Patients
Human immunodeficiency virus (HIV) infection has continued to be the subject of study since its discovery nearly 40 years ago. Significant advances in research and intake of antiretroviral therapy (ART) have slowed the progression and appearance of the disease symptoms and the incidence of concomitant diseases, which are the leading cause of death in HIV+ persons.
  • 762
  • 01 Jun 2022
Topic Review
Immunobridging of Animal and Human Data
The Food and Drug Administration (FDA) Animal Rule was devised to facilitate approval of candidate vaccines and therapeutics using animal survival data when human efficacy studies are not practical or ethical. This regulatory pathway is critical for candidates against pathogens with high case fatality rates that prohibit human challenge trials, as well as candidates with low and sporadic incidences of outbreaks that make human field trials difficult. Important components of a vaccine development plan for Animal Rule licensure are the identification of an immune correlate of protection and immunobridging to humans. The relationship of vaccine-induced immune responses to survival after vaccination and challenge must be established in validated animal models and then used to infer predictive vaccine efficacy in humans via immunobridging.
  • 761
  • 12 Oct 2022
Topic Review
Neutrophils and Flaviviruses
Neutrophils are first-line responders to infections and are recruited to target tissues through the action of chemoattractant molecules, such as chemokines. Neutrophils are crucial for the control of bacterial and fungal infections, but their role in the context of viral infections has been understudied. Flaviviruses are important human viral pathogens transmitted by arthropods. Infection with a flavivirus may result in a variety of complex disease manifestations, including hemorrhagic fever, encephalitis or congenital malformations. Our understanding of flaviviral diseases is incomplete, and so is the role of neutrophils in such diseases. Here we present a comprehensive overview on the participation of neutrophils in severe disease forms evolving from flavivirus infection, focusing on the role of chemokines and their receptors as main drivers of neutrophil function. Neutrophil activation during viral infection was shown to interfere in viral replication through effector functions, but the resulting inflammation is significant and may be detrimental to the host. For congenital infections in humans, neutrophil recruitment mediated by CXCL8 would be catastrophic. 
  • 760
  • 24 Nov 2021
Topic Review
Three-Dimensional Cultures in Fungal Pathogenesis
Three-dimensional (3D) cultures are pivotal in vitro studies as an alternative model that curtails research expenses. Three-dimensional (3D) cell cultures are extensively employed for novel drug screening of antifungals. Several advantages are tied to obtaining more precise toxicity and efficacy results than in vivo models, along with host–pathogen interactions closely mimicking reality.
  • 757
  • 12 Oct 2023
Topic Review
Interferon-Gamma Release Assays in Physiologically Immunocompromised People
Interferon-gamma release assays (IGRAs) are widely used in the diagnosis of Mycobacterium tuberculosis (M. tuberculosis) infection by detecting interferon-γ released by previously sensitized T-cells in-vitro. The performance of IGRAs is different in population with physiologically Immunocompromised factors.
  • 754
  • 15 Apr 2022
Topic Review
Clinical Applications of the Microbiome in Oral Mucositis
Oral mucositis (OM) is a common and impactful toxicity of standard cancer therapy, affecting up to 80% of patients. Its aetiology centres on the initial destruction of epithelial cells and the increase in inflammatory signals. These changes in the oral mucosa create a hostile environment for resident microbes, with oral infections co-occurring with OM, especially at sites of ulceration. However, increasing evidence suggests that oral microbiome changes occur beyond opportunistic infection, with a growing appreciation for the potential role of the microbiome in OM development and severity.
  • 753
  • 19 May 2023
Topic Review
Detection of persistent virus-DNA in Formalin Fixed samples
The DNA damage and cross-linking induced by formalin fixation can hinder nucleic acid screening. This is of particular concern in the detection of low-abundance targets, such as persistent DNA viruses, present only as a part per million of the total DNA in a sample. We evaluated the analytical sensitivity of the detection of persistent viruses in tissue specimens fixed in formalin for up to 10 days. To this end, we used short amplicon qPCRs and targeted enrichment plus Next-generation sequencing.
  • 752
  • 20 Jan 2022
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