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Meinzer, M.; Ahmad, N.; Nielsen, B.L. Bacteria and Their Association with Plants. Encyclopedia. Available online: https://encyclopedia.pub/entry/52588 (accessed on 01 September 2024).
Meinzer M, Ahmad N, Nielsen BL. Bacteria and Their Association with Plants. Encyclopedia. Available at: https://encyclopedia.pub/entry/52588. Accessed September 01, 2024.
Meinzer, Mckay, Niaz Ahmad, Brent L. Nielsen. "Bacteria and Their Association with Plants" Encyclopedia, https://encyclopedia.pub/entry/52588 (accessed September 01, 2024).
Meinzer, M., Ahmad, N., & Nielsen, B.L. (2023, December 11). Bacteria and Their Association with Plants. In Encyclopedia. https://encyclopedia.pub/entry/52588
Meinzer, Mckay, et al. "Bacteria and Their Association with Plants." Encyclopedia. Web. 11 December, 2023.
Bacteria and Their Association with Plants
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The salinization of soils is a growing agricultural concern worldwide. Irrigation practices, drought, and climate change are leading to elevated salinity levels in many regions, resulting in reduced crop yields. However, there is potential for a solution in the microbiome of halophytes, which are naturally salt-tolerant plants. These plants harbor a salt-tolerant microbiome in their rhizosphere (around roots) and endosphere (within plant tissue). These bacteria may play a significant role in conferring salt tolerance to the host plants. 

salt tolerance halophilic bacteria Halomonas Kushneria

1. The Relationship between Bacteria and Plants in the Rhizosphere

The rhizosphere is the area in soil that immediately surrounds the roots of plants [1][2]. The rhizosphere contains countless species and a vast diversity of microorganisms [1][3]. One important component of the rhizosphere is plant mucilage. Mucilage is excreted by plant root tissue and can serve as a carbon source for microorganisms. The amount and composition of the mucilage can have a large impact on the bacterial species that live in the rhizosphere [2][4][5]. By excreting mucilage, plants attract beneficial microbes to the rhizosphere and benefit from microbial ability to break down sugars, fix nitrogen, suppress pathogens, etc. Mucilage can also play a role in attracting and supplying sugars for halophilic bacteria. These halophilic rhizobacteria could then, in turn, aid plants in saline soils. Bacteria found to be associated with the roots and that stimulate plant growth are termed plant-growth-promoting rhizobacteria (PGPR), and along with those that become established within plant tissue as endophytes are more broadly termed PGPB (plant-growth-promoting bacteria).
Species of bacteria and fungi that live within plant tissues without causing harm to the plant are defined as bacterial and fungal endophytes, respectively. There has been increasing interest in the role of endophytes in plant adaptation to different adverse environmental conditions in a variety of ways, as outlined in Figure 1 [6][7]. It has been well-established that microorganisms associated with plants thriving under harsh environmental niches play a crucial role in their adaptations to these suboptimal conditions [8]. The key mechanisms involved in such microbial-mediated adaptations to different stresses include modulation of phytohormones biosynthesis (auxins, cytokinins, gibberellins, abscisic acid, ACC deaminase (1-aminocyclopropane-1-carboxylate deaminase), brassinosteroids, and ethylene), accumulation of osmoprotectants (betaines, proline, and soluble sugars), upregulation of different defense genes, and production of secondary metabolites [8][9].
Figure 1. Effects of salt stress on plants and potential mechanisms of PGPR effects on plant growth in salty soils.
Plant hormones are chemical messengers that regulate various physiological processes in plants, including plant growth, development, and response to environmental stimuli such as light, temperature, and stress [10][11]. These hormones are master regulators, enabling plants to adapt and thrive in changing environmental conditions [12][13]. The diversity of phytohormones mirrors the multifaceted challenges that plants encounter in their environments. Each type of hormone is specialized in governing specific physiological responses, yet their interplay creates a sophisticated web of regulations that facilitate seamless coordination between different cellular and developmental processes. Moreover, plants often exhibit pleiotropy, where a single phytohormone can have widespread effects, influencing various aspects of plant life, while multiple hormones collaborate to finetune a particular biological event. This intricately woven system of phytohormonal control empowers plants to maintain homeostasis and optimize their growth in response to internal and external cues. In response to environmental changes, such as light, temperature, water availability, or the presence of pests and pathogens, plants dynamically adjust their phytohormone profiles. Studies have shown that in the presence of high concentrations of salt, production of auxin is severely limited. Plants grown in salty soils had insufficient auxin levels and suffered from stunted growth [13]. Different bacterial strains have been shown to induce hormone production and supplement those produced by the plant through the function of microRNAs (miRNAs) [12][14]. If a plant has insufficient hormone levels, the growth and development of the plant, as well as the fruit, can suffer and yield can be significantly decreased.
Indole-3-acetic acid (IAA) is a plant hormone that regulates the production of new root and shoot tissues. It has been shown that IAA produced by bacteria can induce adventitious shoot growth [9][12][15][16][17]. High salinity induces the utilization of 1-aminocyclopropane-1-carboxylic acid (ACC). ACC is a precursor for ethylene, a plant hormone that mediates a wide range of essential plant responses. However, at elevated levels, ethylene has a deleterious effect on root and shoot elongation, leaf expansion, and overall plant health [17]. ACC deaminase is an enzyme that breaks down ACC, preventing the production of ethylene, and it can alleviate the stress response in plants. ACC deaminase-producing bacteria can help aid the plant when it is under salt stress, and even help promote plant growth and antioxidant production [17], as has been shown for the French bean [18].
Microorganisms are known to produce over 20,000 different secondary metabolites [19]. These metabolites can affect the survival and performance of other organisms. Not only do endophytes produce secondary metabolites beneficial to plant growth and disease response but endophytes also produce novel biomolecules and plant growth promotors [20]. Because of these beneficial effects, the utilization of these endophytes holds potential to improve plant growth, particularly under adverse environmental conditions such as on marginal lands, and it may confer resilience to climate change.

2. Halophilic Bacteria with PGPB Potential

There are a considerable number of Bacillus strains that have been identified as having general PGPB activity (reviewed in [21]). To date, there has been some limited analysis of possible functions as ST-PGPB for some, which is briefly summarized here. One recent report suggests that a soil Bacillus strain is recruited to coastal halophytes by exudates from plant roots, but this work does not include plant growth stimulation studies [22]. There is also an interesting recent publication on combinations of a Bacillus strain with other bacteria including a Pseudomonas strain to promote plant growth [23]. Other work has shown the promise of a combination of bacterial and mycorrhizal fungal applications in enhancing soil fertility and rice production due to enhanced mineral uptake from the soil [24].
The microbial community found to be associated with halophytes growing in saline soils represents a rich source of ST-PGPB (salt-tolerant, halophilic, rhizobacteria, or endophytes) [25][26][27][28][29][30][31][32][33][34][35][36][37][38][39]. Improvement of soil health and potential in bioremediation have also been reported [13][26]. A combination of strains may provide synergistic benefits. For example, one recent study showed the value of using a consortium of multiple halophilic strains isolated from halophytes to improve the growth of several crops under saline conditions [40]. Other studies have shown beneficial effects of ST-PGPB in reducing salt stress and improving yield in rice [41][42]. PGPB strains that have ACC deaminase and ROS scavenging activity have been shown to contribute to amelioration of salinity stress [43]. These reports provide a strong foundation for the use of halophiles isolated from the rhizosphere or roots of halophytes as inocula to stimulate the growth of salt-sensitive crops [44][45]. Recently, an Actinomycete was found to have antifungal activity and alleviate salt stress in tomato [46]. Another Actinomycete was reported to promote the growth of a halophyte using irrigation with seawater. Some biofilm-forming strains of Bacillus have been shown to enhance the growth of maize in saline conditions [47][48]. Another example is Bacillus subtilis (GB03), which was identified as a rhizosphere bacterium that stimulates growth of white clover under saline conditions [49], and which has since been renamed Bacillus amyloliquifaciens GB03 [50][51]. This strain produces volatile compounds that enhance plant photosynthetic capacity and chlorophyll content and induces an elevation of endogenous sugar content and suppression of abscisic acid (ABA)-induced RNA transcripts. Some of these strains also aid in dealing with other types of abiotic stress [52]. B. amyloliquifaciences GB03 has been shown to stimulate tall fescue growth under nitrogen limitation by altering regulation of phytohormones and nutrient homeostasis [53][54]. Other effects include alterations of plant gene expression, including upregulated expression of the HKT1 sodium transporter gene in shoots and downregulated expression in roots, which results in lower sodium accumulation throughout the plant [49][55].
In addition to PGPR isolated from soil around plant roots, endophytes (bacteria growing within plant tissues) have also been identified that stimulate plant growth [45][56][57]. Mechanisms by which endophytes enhance plant growth are thought to include enhanced nutrient acquisition and changes in host plant gene expression. For example, ACC (1-aminocyclopropane-1-carboxylase) deaminase is a bacterial enzyme found in many endophytes that stimulates nutrient acquisition and plant growth by reducing the amount of ACC converted to ethylene, a known inhibitor of plant growth, in response to salt, drought, and other environmental stresses [45][58][59]. Burkholderia phytofirmans is an endophyte that alters plant gene expression to enhance growth of six of the eight cultivars of switchgrass that were tested [56]. Inoculation with this strain was found to induce wide-spread changes in gene expression in the plant host, including altered expression of some transcription factors that are known to regulate the expression of plant stress factor genes [60]. Other bacterial endophytes (species of Sphingomonas, Pantoea, Bacillus, and Enterobacter) have been identified that enhance the salt tolerance of hybrid elephant grass [34], likely because of enhanced nutrient acquisition and/or gene expression changes [61].

3. Bacterial Strategies to Overcome Salinity Stress

Salt stress is one of the largest abiotic factors that can impact growth of an organism, including bacteria, which are also susceptible to osmotic stress. Halophilic bacteria have multiple mechanisms to counteract the osmotic stress of saline environments. There are two main types of adaptation mechanisms that halophiles use to prevent desiccation in the presence of salt: accumulation of water-soluble organic compounds in the cytoplasm and controlling the flux of inorganic ions. The main way that bacteria control the flux of inorganic ions is by exporting K+ ions to offset the influx of Na2+ ions. In addition, many halophiles utilize accumulation of water-soluble organic compounds (ectoine, hydroxyectoine, betaine, and choline) to offset the osmotic stress of highly saline environments. The accumulation of these compounds, or osmolytes, helps to draw water into the bacterial cell, preventing desiccation of the cell [62]. Another strategy that is employed by a wide variety of halophiles is controlling the flux of inorganic ions in the cell. If a cell has an influx of inorganic ions, this can lead to desiccation of the cell and eventual death of the organism. One method to prevent this influx of ions, typically sodium ions, is to actively pump intracellular potassium outside of the cell. This potassium typically comes in the form of KCl, and the export of KCl helps to offset the influx of NaCl from the saline environment [62].
It appears that in addition to the mechanisms used by PGPBs in general, there may be different mechanisms for PGPB stimulation of plant growth in saline conditions depending on the plant and bacterial species involved. The mechanism(s) by which halophilic bacteria stimulate plant growth may involve production of volatile compounds or other signals that stimulate expression of genes to enhance growth via increased photosynthesis [63] and other processes, including increased expression of plant membrane ion transport proteins. Other mechanisms that have been proposed include, but may not be limited to, the following ([32], Figure 1 and Table 1):
Table 1. List of selected studies reporting improved salt tolerance of field crops or phytoremediation by Kushneria and Halomonas species.
  • Some microbes produce biofilm/exopolysaccharides in the rhizosphere that trap water and nutrients and decrease plant uptake of sodium ions from the soil.
  • Some microbes inhibit growth of fungi and plant pathogens and/or select a certain microbial community in the rhizosphere.
  • Enhance plant access to nutrients.
  • Some microbes function as phytostimulators to produce ABA, IAA, and other plant hormones that stimulate shoot formation and plant growth by enhancing expression of specific plant genes.
  • Microbes can function as biofertilizers to produce nutrients or improve nitrogen fixation for the plant and/or enhance photosynthesis.
  • Solubilization and translocation of ions such as phosphate and iron (by siderophores) to the plant. Phosphate and iron are critical to the plant but are often in low abundance or present only in inorganic forms that must be solubilized for use by plants ([47][48], Table 1).

4. Salt Tolerant Bacterial Genus Kushneria

While much of the published work has focused on Bacillus species or other Gram-positive bacteria, some Gram-negative bacteria also have been shown to have PGPB potential. Two that have been shown to stimulate plant growth of salt-sensitive plants in salty soil are Kushneria and Halomonas (Table 1). Kushneria is a genus of bacteria in the Halomonadaceae family and comprises halophiles. The genus Kushneria was formed in 2009 when Halomonas marisflavi along with two other Halomonas strains were moved into this novel genus [80]. One of the most notable features of Kushneria is its ability to grow in high salt concentrations. Studies have shown that some species of Kushneria can grow in up to 25% NaCl concentration, which is higher than the salt concentration of seawater. This makes the genus an interesting subject of research for its potential use in bioremediation of saline soils, as well as in the production of salt-tolerant crops. Strains of Kushneria have been isolated from a variety of different salty environments, including a solar saltern, the leaves of black mangroves, sea water, salt mines, cured meats, and salt fermented foods [81][82][83][84][85][86][87]. Many species in this genus are adapted to hypersaline environments, and different strains have been isolated from the rhizosphere as well as the endosphere of halophytes [83][88]. These bacteria exhibit the ability to produce a variety of osmolytes, bioactive compounds (including betaine and ectoine that help protect from stress), and plant growth hormones [83][88]. Certain Kushneria species have been found to promote plant growth and act as biofertilizers or may function in phytoremediation, especially in saline agricultural soils [89]. A study by Parida and Das [90] revealed that Kushneria sp. NRCC 31,399 enhanced the growth of rice plants under saline conditions, indicating its potential use as a bioinoculant for salt-affected agricultural lands. Kushneria species are known for their ability to accumulate compatible solutes, which are small organic molecules that help the bacteria to cope with osmotic stress. These solutes have potential applications in various industries. In a study by Kulkarni et al. [91], Kushneria sp. GSB1 was found to produce the compatible solutes ectoine and hydroxyectoine in considerable amounts, highlighting the biotechnological potential of this genus in the production of these valuable compounds. Studies have shown that some species of Kushneria produce compounds that exhibit antimicrobial activity against various pathogenic bacteria and fungi. This suggests that Kushneria may have potential applications in the development of novel antibiotics and antifungal agents. Kushneria strains have been isolated from both the endosphere and the rhizosphere of plants and many exhibit the ability to produce a variety of plant hormones (Table 1). These examples demonstrate the diverse and promising biotechnological applications of Kushneria species. Continued research and exploration of this salt-tolerant bacterial genus may uncover even more practical uses in the future.
Kushneria and Halomonas bacteria have been isolated from a halophyte, Salicornia, in Tunisia, and some have been shown to have plant growth promotion activity [28]. A Kushneria marisflavi isolate in combination with Pseudomonas stutzeri was found to reduce salinity-stress-induced damage in lettuce and barley [66]. Despite the potential applications of Kushneria, much of its biology remains poorly understood. Further research is needed to fully elucidate the metabolic capabilities and genetic makeup of the genus. This would not only provide insights into the biology of Kushneria but also pave the way for the development of new biotechnological applications of the genus.

5. Salt-Tolerant Bacterial Genus Halomonas

Halomonas bacteria are able to grow in high-salt conditions and at high pH values. Halomonas can also resist contamination by other microbes, due to its ability to grow in highly saline and alkali conditions [56]. Halomonas spp. have been isolated from the endosphere of different plants, shrubs, and trees. They have been identified as Gram-negative, aerobic with yellow pigmentation, and are rod shaped [92]. Strains of Halomonas have been isolated from a variety of highly saline environments including salt marshes, the endosphere of halophytes, salt-cured meats, and fermented foods [89][92][93][94][95]. Bacteria from this genus have been found that produce a wide variety of diverse biochemicals and exopolysaccharides (EPSs) [93][94]. Table 1 includes other Halomonas strains that have been reported.
Some Halomonas species isolated from plants have been shown to have potential as PGPB [96][97] or in phytoremediation to improve soils [89] (Table 1). A collection of halotolerant microbes isolated from Salicornia ramiosissima [96] contains some isolates with PGPB activity. Two Halomonas and two Bacillus strains were identified from the rhizosphere of quinoa that have different activities as PGPB, and it was shown that these strains exhibit beneficial traits that are salt-regulated [97].
A consortium of five Halomonas strains was shown to improve salt tolerance of rice [71], suggesting that combinations of two or more strains may provide synergism. In wheat, inoculation with Halomonas sp. 3H led to an increase in chlorophylls, carotenoids, sugars, and phenolics [73]. Halomonas sp. MAN5 improved root growth of Sesuvium portulcastrum [75]. In separate studies, several other Halomonas strains have been shown to enhance salt tolerance in purple basil [76], maize [77], chickpea [95], and sunflower [79]. One Halomonas strain, H. ventosae JPT10, was tested with multiple plants and enhanced salt tolerance in foxtail millet, soybean, tomato, wheat, and maize [98], indicating that some strains may serve as PGPB for multiple crop species.

References

  1. Hinsinger, P.; Bengough, A.G.; Vetterlein, D.; Young, I.M. Rhizosphere: Biophysics, biogeochemistry and ecological relevance. Plant Soil. 2009, 321, 117–152.
  2. Carminati, A.; Vetterlein, D. Plasticity of rhizosphere hydraulic properties as a key for efficient utilization of scarce resources. Ann. Bot. 2013, 112, 277–290.
  3. Bangash, A.; Ahmed, I.; Abbas, S.; Kudo, T.; Shahzad, A.; Fujiwara, T.; Ohkuma, M. Kushneria pakistanensis sp nov., a novel moderately halophilic bacterium isolated from rhizosphere of a plant (Saccharum spontaneum) growing in salt mines of the Karak area in Pakistan. Antonie Leeuwenhoek 2015, 107, 991–1000.
  4. Nazari, M. Plant mucilage components and their functions in the rhizosphere. Rhizosphere 2021, 18, 100344.
  5. Tam, L.; Derry, A.M.; Kevan, P.G.; Trevors, J.T. Functional diversity and community structure of microorganisms in rhizosphere and non-rhizosphere Canadian arctic soils. Biodivers. Conserv. 2001, 10, 1933–1947.
  6. Miller, A.K.; Nielsen, B.L. Analysis of gene expression changes in plants grown in salty soil in response to inoculation with halophilic bacteria. Int. J. Mol. Sci. 2021, 22, 3611.
  7. Ahlawat, O.P.; Yadav, D.; Kashyap, P.L.; Khippal, A.; Singh, G. Wheat endophytes and their potential role in managing abiotic stress under changing climate. J. Appl. Microbiol. 2021, 132, 2501–2520.
  8. Fatima, I.; Hakim, S.; Imran, A.; Ahmad, N.; Imtiaz, M.; Ali, H.; Islam, E.-u.; Yousaf, S.; Mirza, M.S.; Mubeen, F. Exploring biocontrol and growth-promoting potential of multifaceted PGPR isolated from natural suppressive soil against the causal agent of chickpea wilt. Microbiol. Res. 2022, 260, 127015.
  9. Almuhayawi, M.S.; Abdel-Mawgoud, M.; Al Jaouni, S.K.; Almuhayawi, S.M.; Alruhaili, M.H.; Selim, S.; Abd Elgawad, H. Bacterial Endophytes as a Promising Approach to Enhance the Growth and Accumulation of Bioactive Metabolites of Three Species of Chenopodium Sprouts. Plants 2021, 10, 2745.
  10. Carraher, C.E.; Carraher, S.M.; Stewart, H.H. Plant Growth Hormone-Containing Polymers for Enhanced Seed Germination and Plant Growth. J. Polym. Mater. 2011, 28, 285–299.
  11. Miransari, M.; Smith, D.L. Plant hormones and seed germination. Environ. Exp. Bot. 2014, 99, 110–121.
  12. Zhang, W.X.; Gao, S.; Zhou, X.A.; Chellappan, P.; Chen, Z.; Zhou, X.F.; Zhang, X.M.; Fromuth, N.; Coutino, G.; Coffey, M.; et al. Bacteria-responsive microRNAs regulate plant innate immunity by modulating plant hormone networks. Plant Mol. Biol. 2011, 75, 93–105.
  13. Ryu, H.; Cho, Y.G. Plant hormones in salt stress tolerance. J. Plant Biol. 2015, 58, 147–155.
  14. Kumar, R.; Khurana, A.; Sharma, A.K. Role of plant hormones and their interplay in development and ripening of fleshy fruits. J. Exp. Bot. 2014, 65, 4561–4575.
  15. Husseiny, S.; Dishisha, T.; Soliman, H.A.; Adeleke, R.; Raslan, M. Characterization of growth promoting bacterial endophytes isolated from Artemisia annua L. S. Afr. J. Bot. 2021, 143, 238–247.
  16. Ali, B.; Hasnain, S. Potential of bacterial indoleacetic acid to induce adventitious shoots in plant tissue culture. Lett. Appl. Microbiol. 2007, 45, 128–133.
  17. Afridi, M.S.; Amna; Sumaira; Mahmoode, T.; Salam, A.; Mukhtar, T.; Mehmood, S.; Ali, J.; Khatoon, Z.; Bibi, M.; et al. Induction of tolerance to salinity in wheat genotypes by plant growth promoting endophytes: Involvement of ACC deaminase and antioxidant enzymes. Plant Physiol. Biochem. 2019, 139, 569–577.
  18. Gupta, S.; Pandey, S. ACC Deaminase Producing Bacteria With Multifarious Plant Growth Promoting Traits Alleviates Salinity Stress in French Bean (Phaseolus vulgaris) Plants. Front. Microbiol. 2019, 10, 1506.
  19. Brader, G.; Compant, S.; Mitter, B.; Trognitz, F.; Sessitsch, A. Metabolic potential of endophytic bacteria. Curr. Opin. Biotechnol. 2014, 27, 30–37.
  20. Jana, S.K.; Islam, M.M.; Mandal, S. Endophytic Microbiota of Rice and Their Collective Impact on Host Fitness. Curr. Microbiol. 2022, 79, 37.
  21. Kashyap, B.K.; Solanki, M.K.; Pandey, A.K.; Prabha, S.; Kumar, P.; Kumari, B. Bacillus as plant growth promoting rhizobacteria (PGPR): A promising green agriculture technology. In Plant Health under Biotic Stress: Microbial Interactions; Springer: Berlin/Heidelberg, Germany, 2019; pp. 219–236.
  22. Xiong, Y.-W.; Li, X.-W.; Wang, T.-T.; Gong, Y.; Zhang, C.-M.; Xing, K.; Qin, S. Root exudates-driven rhizosphere recruitment of the plant growth-promoting rhizobacterium Bacillus flexus KLBMP 4941 and its growth-promoting effect on the coastal halophyte Limonium sinense under salt stress. Ecotoxicol. Environ. Saf. 2020, 194, 110374.
  23. Comeau, D.; Balthazar, C.; Novinscak, A.; Bouhamdani, N.; Joly, D.L.; Filion, M. Interactions between Bacillus spp., Pseudomonas Spp. and Cannabis sativa promote Plant Growth. Front. Microbiol. 2021, 12, 715758.
  24. Chen, D.; Saeed, M.; Ali, M.N.H.A.; Raheel, M.; Ashraf, W.; Hassan, Z.; Hassan, M.Z.; Farooq, U.; Hakim, M.F.; Rao, M.J.; et al. Plant Growth Promoting Rhizobacteria (PGPR) and Arbuscular Mycorrhizal Fungi Combined Application Reveals Enhanced Soil Fertility and Rice Production. Agronomy 2023, 13, 550.
  25. Egamberdieva, D.; Wirth, S.; Bellingrath-Kimura, S.D.; Mishra, J.; Arora, N.K. Salt-Tolerant Plant Growth Promoting Rhizobacteria for Enhancing Crop Productivity of Saline Soils. Front. Microbiol. 2019, 10, 2791.
  26. Kumar Arora, N.; Fatima, T.; Mishra, J.; Mishra, I.; Verma, S.; Verma, R.; Verma, M.; Bhattacharya, A.; Verma, P.; Mishra, P.; et al. Halo-tolerant plant growth promoting rhizobacteria for improving productivity and remediation of saline soils. J. Adv. Res. 2020, 26, 69–82.
  27. Shultana, R.; Zuan, A.T.K.; Naher, U.A.; Islam, A.M.; Rana, M.M.; Rashid, M.H.; Irin, I.J.; Islam, S.S.; Rim, A.A.; Hasan, A.K. The PGPR Mechanisms of Salt Stress Adaptation and Plant Growth Promotion. Agronomy 2022, 12, 2266.
  28. Mapelli, F.; Marasco, R.; Rolli, E.; Barbato, M.; Cherif, H.; Guesmi, A.; Ouzari, I.; Daffonchio, D.; Borin, S. Potential for Plant Growth Promotion of Rhizobacteria Associated with Salicornia Growing in Tunisian Hypersaline Soils. Biomed Res. Int. 2013, 2013, 248078.
  29. Orhan, F. Alleviation of salt stress by halotolerant and halophilic plant growth-promoting bacteria in wheat (Triticum aestivum). Braz. J. Microbiol. 2016, 47, 621–627.
  30. Tahir Ata-Ul-Karim, S.; Liu, X.; Lu, Z.; Yuan, Z.; Zhu, Y.; Cao, W. In-season estimation of rice grain yield using critical nitrogen dilution curve. Field Crops Res. 2016, 195, 1–8.
  31. Etesami, H.; Maheshwari, D.K. Use of plant growth promoting rhizobacteria (PGPRs) with multiple plant growth promoting traits in stress agriculture: Action mechanisms and future prospects. Ecotoxicol. Environ. Saf. 2018, 156, 225–246.
  32. Numan, M.; Bashir, S.; Khan, Y.; Mumtaz, R.; Shinwari, Z.K.; Khan, A.L.; Khan, A.; Al-Harrasi, A. Plant growth promoting bacteria as an alternative strategy for salt tolerance in plants: A review. Microbiol. Res. 2018, 209, 21–32.
  33. Meena, S.K.; Rakshit, A.; Singh, H.B.; Meena, V.S. Effect of nitrogen levels and seed bio-priming on root infection, growth and yield attributes of wheat in varied soil type. Biocatal. Agric. Biotechnol. 2017, 12, 172–178.
  34. Li, X.; Geng, X.; Xie, R.; Fu, L.; Jiang, J.; Gao, L.; Sun, J. The endophytic bacteria isolated from elephant grass (Pennisetum purpureum Schumach) promote plant growth and enhance salt tolerance of Hybrid Pennisetum. Biotechnol. Biofuels 2016, 9, 190.
  35. Ruppel, S.; Franken, P.; Witzel, K. Properties of the halophyte microbiome and their implications for plant salt tolerance. Funct. Plant Biol. 2013, 40, 940–951.
  36. Sharma, S.; Kulkarni, J.; Jha, B. Halotolerant rhizobacteria promote growth and enhance salinity tolerance in peanut. Front. Microbiol. 2016, 7, 1600.
  37. Kataoka, R.; Güneri, E.; Turgay, O.C.; Yaprak, A.E.; Sevilir, B.; Başköse, I. Sodium-resistant plant growth-promoting rhizobacteria isolated from a halophyte, Salsola grandis, in saline-alkaline soils of Turkey. Eurasian J. Soil Sci. 2017, 6, 216–225.
  38. Navarro-Torre, S.; Barcia-Piedras, J.; Mateos-Naranjo, E.; Redondo-Gómez, S.; Camacho, M.; Caviedes, M.; Pajuelo, E.; Rodríguez-Llorente, I. Assessing the role of endophytic bacteria in the halophyte Arthrocnemum macrostachyum salt tolerance. Plant Biol. 2017, 19, 249–256.
  39. Kumar, A.; Singh, S.; Mukherjee, A.; Rastogi, R.P.; Verma, J.P. Salt-tolerant plant growth-promoting Bacillus pumilus strain JPVS11 to enhance plant growth attributes of rice and improve soil health under salinity stress. Microbiol. Res. 2021, 242, 126616.
  40. Redondo-Gómez, S.; Mesa-Marín, J.; Pérez-Romero, J.A.; López-Jurado, J.; García-López, J.V.; Mariscal, V.; Molina-Heredia, F.P.; Pajuelo, E.; Rodríguez-Llorente, I.D.; Flowers, T.J. Consortia of plant-growth-promoting rhizobacteria isolated from halophytes improve response of eight crops to soil salinization and climate change conditions. Agronomy 2021, 11, 1609.
  41. Khumairah, F.H.; Setiawati, M.R.; Fitriatin, B.N.; Simarmata, T.; Alfaraj, S.; Ansari, M.J.; Enshasy, H.A.E.; Sayyed, R.; Najafi, S. Halotolerant plant growth-promoting rhizobacteria isolated from saline soil improve nitrogen fixation and alleviate salt stress in rice plants. Front. Microbiol. 2022, 13, 905210.
  42. Sultana, S.; Paul, S.C.; Parveen, S.; Alam, S.; Rahman, N.; Jannat, B.; Hoque, S.; Rahman, M.T.; Karim, M.M. Isolation and identification of salt-tolerant plant-growth-promoting rhizobacteria and their application for rice cultivation under salt stress. Can. J. Microbiol. 2020, 66, 144–160.
  43. Bharti, N.; Barnawal, D. Amelioration of Salinity Stress by PGPR: ACC Deaminase and ROS Scavenging Enzymes Activity. In PGPR Amelioration in Sustainable Agriculture; Singh, A.K., Kumar, A., Singh, P.K., Eds.; Woodhead Publishing: Sawston, UK, 2019; pp. 85–106.
  44. Haney, C.H.; Samuel, B.S.; Bush, J.; Ausubel, F.M. Associations with rhizosphere bacteria can confer an adaptive advantage to plants. Nat. Plants 2015, 1, 15051.
  45. Santoyo, G.; Moreno-Hagelsieb, G.; del Carmen Orozco-Mosqueda, M.; Glick, B.R. Plant growth-promoting bacterial endophytes. Microbiol. Res. 2016, 183, 92–99.
  46. Gong, Y.; Chen, L.-J.; Pan, S.-Y.; Li, X.-W.; Xu, M.-J.; Zhang, C.-M.; Xing, K.; Qin, S. Antifungal potential evaluation and alleviation of salt stress in tomato seedlings by a halotolerant plant growth-promoting actinomycete Streptomyces sp. KLBMP5084. Rhizosphere 2020, 16, 100262.
  47. Çam, S.; Küçük, Ç.; Almaca, A. Bacillus strains exhibit various plant growth promoting traits and their biofilm-forming capability correlates to their salt stress alleviation effect on maize seedlings. J. Biotechnol. 2023, 369, 35–42.
  48. Zakavi, M.; Askari, H.; Shahrooei, M. Maize growth response to different Bacillus strains isolated from a salt-marshland area under salinity stress. BMC Plant Biol. 2022, 22, 367.
  49. Han, Q.-Q.; Lü, X.-P.; Bai, J.-P.; Qiao, Y.; Paré, P.W.; Wang, S.-M.; Zhang, J.-L.; Wu, Y.-N.; Pang, X.-P.; Xu, W.-B.; et al. Beneficial soil bacterium Bacillus subtilis (GB03) augments salt tolerance of white clover. Front. Plant Sci. 2014, 5, 525.
  50. Wu, X.H.; Fan, Y.N.; Wang, R.Y.; Zhao, Q.; Ali, Q.; Wu, H.J.; Gu, Q.; Borriss, R.; Xie, Y.L.; Gao, X.W. Bacillus halotolerans KKD1 induces physiological, metabolic and molecular reprogramming in wheat under saline condition. Front. Plant Sci. 2022, 13, 978066.
  51. Wan, J.J.; Wang, F.; Zhang, X.Y.; Xin, Y.; Tian, J.W.; Zhang, Y.Z.; Li, C.Y.; Fu, H.H. Genome sequencing and comparative genomics analysis of Halomonas sp. MT13 reveal genetic adaptation to deep-sea environment. Mar. Genom. 2022, 61, 100911.
  52. Bouremani, N.; Cherif-Silini, H.; Silini, A.; Bouket, A.C.; Luptakova, L.; Alenezi, F.N.; Baranov, O.; Belbahri, L. Plant Growth-Promoting Rhizobacteria (PGPR): A Rampart against the Adverse Effects of Drought Stress. Water 2023, 15, 418.
  53. Calvo, P.; Zebelo, S.; McNear, D.; Kloepper, J.; Fadamiro, H. Plant growth-promoting rhizobacteria induce changes in Arabidopsis thaliana gene expression of nitrate and ammonium uptake genes. J. Plant Interac. 2019, 14, 224–231.
  54. Wang, Q.; Ou, E.-L.; Wang, P.-C.; Chen, Y.; Wang, Z.-Y.; Wang, Z.-W.; Fang, X.-W.; Zhang, J.-L. Bacillus amyloliquefaciens GB03 augmented tall fescue growth by regulating phytohormone and nutrient homeostasis under nitrogen deficiency. Front. Plant Sci. 2022, 13, 979883.
  55. Xie, X.; Zhang, H.; Pare, P. Sustained growth promotion in Arabidopsis with long-term exposure to the beneficial soil bacterium Bacillus subtilis (GB03). Plant Signal. Behav. 2009, 4, 948–953.
  56. Kim, S.; Lowman, S.; Hou, G.; Nowak, J.; Flinn, B.; Mei, C. Growth promotion and colonization of switchgrass (Panicum virgatum) cv. Alamo by bacterial endophyte Burkholderia phytofirmans strain PsJN. Biotechnol. Biofuels 2012, 5, 37.
  57. Lowman, S.; Kim-Dura, S.; Mei, C.; Nowak, J. Strategies for enhancement of switchgrass (Panicum virgatum L.) performance under limited nitrogen supply based on utilization of N-fixing bacterial endophytes. Plant Soil 2016, 405, 47–63.
  58. Glick, B.R.; Penrose, D.M.; Li, J. A Model For the Lowering of Plant Ethylene Concentrations by Plant Growth-promoting Bacteria. J. Theor. Biol. 1998, 190, 63–68.
  59. Mitter, B.; Petric, A.; Shin, M.; Chain, P.; Hauberg-Lotte, L.; Reinhold-Hurek, B.; Nowak, J.; Sessitsch, A. Comparative genome analysis of Burkholderia phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles based on interaction strategies with host plants. Front. Plant Sci. 2013, 4, 120.
  60. Lara-Chavez, A.; Lowman, S.; Kim, S.; Tang, Y.; Zhang, J.; Udvardi, M.; Nowak, J.; Flinn, B.; Mei, C. Global gene expression profiling of two switchgrass cultivars following inoculation with Burkholderia phytofirmans strain PsJN. J. Exp. Bot. 2015, 66, 4337–4350.
  61. Meena, K.K.; Sorty, A.M.; Bitla, U.M.; Choudhary, K.; Gupta, P.; Pareek, A.; Singh, D.P.; Prabha, R.; Sahu, P.K.; Gupta, V.K. Abiotic stress responses and microbe-mediated mitigation in plants: The omics strategies. Front. Plant Sci. 2017, 8, 172.
  62. Chen, X.B.; Yu, L.P.; Qiao, G.Q.; Chen, G.Q. Reprogramming Halomonas for industrial production of chemicals. J. Ind. Microbiol. Biotechnol. 2018, 45, 545–554.
  63. Taj, Z.; Challabathula, D. Protection of photosynthesis by halotolerant Staphylococcus sciuri ET101 in tomato (Lycoperiscon esculentum) and rice (Oryza sativa) plants during salinity stress: Possible interplay between carboxylation and oxygenation in stress mitigation. Front. Microbiol. 2021, 11, 547750.
  64. Jamal, M.T.; Pugazhendi, A. Degradation of petroleum hydrocarbons and treatment of refinery wastewater under saline condition by a halophilic bacterial consortium enriched from marine environment (Red Sea), Jeddah, Saudi Arabia. 3 Biotech 2018, 8, 276.
  65. Wang, W.; Sun, X.; Zheng, F.; Zhang, Z.; Wang, Z.; Qu, L.; Hong, X. Salt–alkali-resistant phosphate-solubilizing bacterium: Kushneria sp. YCWA18 improves soil available phosphorus and promotes the growth of Suaeda salsa. J. Plant Growth Regul. 2023, 1–11.
  66. Szymanska, S.; Lis, M.I.; Piernik, A.; Hrynkiewicz, K. Pseudomonas stutzeri and Kushneria marisflavi Alleviate Salinity Stress-Associated Damages in Barley, Lettuce, and Sunflower. Front. Microbiol. 2022, 13, 788893.
  67. Kearl, J.; McNary, C.; Lowman, J.S.; Mei, C.; Aanderud, Z.T.; Smith, S.T.; West, J.; Colton, E.; Hamson, M.; Nielsen, B.L. Salt-tolerant halophyte rhizosphere bacteria stimulate growth of alfalfa in salty soil. Front. Microbiol. 2019, 10, 1849.
  68. Yang, X.; Dai, Z.; Yuan, R.; Guo, Z.; Xi, H.; He, Z.; Wei, M. Effects of salinity on assembly characteristics and function of microbial communities in the phyllosphere and rhizosphere of salt-tolerant Avicennia marina mangrove species. Microbiol. Spectr. 2023, 11, e03000–e03022.
  69. Yañez-Yazlle, M.F.; Romano-Armada, N.; Rajal, V.B.; Irazusta, V.P. Amelioration of Saline Stress on Chia (Salvia hispanica L.) Seedlings Inoculated With Halotolerant Plant Growth-Promoting Bacteria Isolated From Hypersaline Environments. Front. Agron. 2021, 3, 665798.
  70. Bekkaye, M.; Baha, N.; Behairi, S.; MariaPerez-Clemente, R.; Kaci, Y. Impact of Bio-inoculation with Halotolerant Rhizobacteria on Growth, Physiological, and Hormonal Responses of Durum Wheat Under Salt Stress. J. Plant Growth Regul. 2023, 42, 6549–6564.
  71. Mukherjee, P.; Mitra, A.; Roy, M. Halomonas Rhizobacteria of Avicennia marina of Indian Sundarbans Promote Rice Growth Under Saline and Heavy Metal Stresses Through Exopolysaccharide Production. Front. Microbiol. 2019, 10, 1207.
  72. Wang, C.; Hu, H.; Shi, J.; Chen, L.; Wang, L.; Bao, Z. Copper-ion-mediated removal of nitrous oxide by a salt-tolerant aerobic denitrifier Halomonas sp. 3H. Environ. Technol. Innov. 2023, 30, 103045.
  73. Tiwari, S.; Singh, P.; Tiwari, R.; Meena, K.K.; Yandigeri, M.; Singh, D.P.; Arora, D.K. Salt-tolerant rhizobacteria-mediated induced tolerance in wheat (Triticum aestivum) and chemical diversity in rhizosphere enhance plant growth. Biol. Fertil. Soils 2011, 47, 907–916.
  74. Wang, T.; Jiang, Z.; Dong, W.; Liang, X.; Zhang, L.; Zhu, Y. Growth and nitrogen removal characteristics of Halomonas sp. B01 under high salinity. Ann. Microbiol. 2019, 69, 1425–1433.
  75. Desale, P.; Patel, B.; Singh, S.; Malhotra, A.; Nawani, N. Plant growth promoting properties of Halobacillus sp. and Halomonas sp. in presence of salinity and heavy metals. J. Basic Microbiol. 2014, 54, 781–791.
  76. Salimi, A.; Etemadi, M.; Eshghi, S.; Karami, A.; Alizargar, J. The effects of Halomonas sp. and Azotobacter sp. on ameliorating the adverse effect of salinity in purple basil (Ocimum basilicum L.). Preprints 2021, 2021060391.
  77. Qurashi, A.W.; Sabri, A.N. Alleviation of salt stress by Halomonas sp. and osmolytes in Zea mays. Afr. J. Biotechnol. 2011, 10, 17778–17788.
  78. Qurashi, A.W.; Sabri, A.N. Bacterial exopolysaccharide and biofilm formation stimulate chickpea growth and soil aggregation under salt stress. Braz. J. Microbiol. 2012, 43, 1183–1191.
  79. Karamat, M.; Ahmed, A. Impact of Arthrobacter Mysorens, Kushneria Avicenniae, Halomonas Spp and Bacillus Sp on Helianthus annuus L. for growth enhancement. J. Anim. Plant Sci. 2018, 28, 1629–1634.
  80. Sanchez-Porro, C.; de la Haba, R.R.; Soto-Ramirez, N.; Marquez, M.C.; Montalvo-Rodriguez, R.; Ventosa, A. Description of Kushneria aurantia gen. nov., sp nov., a novel member of the family Halomonadaceae, and a proposal for reclassification of Halomonas marisflavi as Kushneria marisflavi comb. nov., of Halomonas indalinina as Kushneria indalinina comb. nov and of Halomonas avicenniae as Kushneria avicenniae comb. nov. Int. J. Syst. Evol. Microbiol. 2009, 59, 397–405.
  81. Yun, J.H.; Bae, J.W. Complete genome sequence of the halophile bacterium Kushneria marisflavi KCCM 80003(T), isolated from seawater in Korea. Mar. Genom. 2018, 37, 35–38.
  82. Yun, J.H.; Park, S.K.; Lee, J.Y.; Jung, M.J.; Bae, J.W. Kushneria konosiri sp nov., isolated from the Korean salt-fermented seafood Daemi-jeot. Int. J. Syst. Evol. Microbiol. 2017, 67, 3576–3582.
  83. Yun, J.H.; Sung, H.; Kim, H.S.; Tak, E.J.; Kang, W.; Lee, J.Y.; Hyun, D.W.; Kim, P.S.; Bae, J.W. Complete genome sequence of the halophile bacterium Kushneria konosiri X49(T), isolated from salt-fermented Konosirus punctatus. Stand. Genom. Sci. 2018, 13, 19.
  84. Bryanskaya, A.V.; Berezhnoy, A.A.; Rozanov, A.S.; Serdyukov, D.S.; Malup, T.K.; Peltek, S.E. Survival of halophiles of Altai lakes under extreme environmental conditions: Implications for the search for Martian life. Int. J. Astrobiol. 2020, 19, 1–15.
  85. Liu, C.L.; Baffoe, D.K.; Zhan, Y.L.; Zhang, M.Y.; Li, Y.H.; Zhang, G.C. Halophile, an essential platform for bioproduction. J. Microbiol. Methods 2019, 166, 105704.
  86. Lanyi, J.K. Salt-dependent properties of proteins from extremely halophilic bacteria. Bacteriol. Rev. 1974, 38, 272–290.
  87. Sanchez-Porro, C.; Martin, S.; Mellado, E.; Ventosa, A. Diversity of moderately halophilic bacteria producing extracellular hydrolytic enzymes. J. Appl. Microbiol. 2003, 94, 295–300.
  88. Navarro-Torre, S.; Carro, L.; Rodriguez-Llorente, I.D.; Pajuelo, E.; Caviedes, M.A.; Igual, J.M.; Redondo-Gomez, S.; Camacho, M.; Klenk, H.P.; Montero-Calasanz, M.D. Kushneria phyllosphaerae sp nov and Kushneria endophytica sp nov plant growth promoting endophytes isolated from the halophyte plant Arthrocnemum macrostachyum. Int. J. Syst. Evol. Microbiol. 2018, 68, 2800–2806.
  89. Navarro-Torre, S.; Mateos-Naranjo, E.; Caviedes, M.; Pajuelo, E.; Rodríguez-Llorente, I. Isolation of plant-growth-promoting and metal-resistant cultivable bacteria from Arthrocnemum macrostachyum in the Odiel marshes with potential use in phytoremediation. Mar. Pollut. Bull. 2016, 110, 133–142.
  90. Parida, A.K.; Das, A.B. Salt tolerance and salinity effects on plants: A review. Ecotoxicol. Environ. Saf. 2005, 60, 324–349.
  91. Kulkarni, S.; Dhakar, K.; Joshi, A. Alkaliphiles: Diversity and bioprospection. In Microbial Diversity in the Genomic Era; Elsevier: Amsterdam, The Netherlands, 2019; pp. 239–263.
  92. Xu, L.; Ying, J.J.; Fang, Y.C.; Zhang, R.; Hua, J.; Wu, M.; Han, B.N.; Sun, C. Halomonas populi sp. nov. isolated from Populus euphratica. Arch. Microbiol. 2022, 204, 86.
  93. Mata, J.A.; Bejar, V.; Llamas, I.; Arias, S.; Bressollier, P.; Tallon, R.; Urdaci, M.C.; Quesada, E. Exopolysaccharides produced by the recently described halophilic bacteria Halomonas ventosae and Halomonas anticariensis. Res. Microbiol. 2006, 157, 827–835.
  94. Tsuji, A.; Takei, Y.; Nishimura, T.; Azuma, Y. Identification of New Halomonas Strains from Food-related Environments. Microbes Environ. 2022, 37, ME21052.
  95. Navarro-Torre, S.; Carro, L.; Rodríguez-Llorente, I.D.; Pajuelo, E.; Caviedes, M.Á.; Igual, J.M.; Klenk, H.-P.; Montero-Calasanz, M.d.C. Halomonas radicis sp. nov., isolated from Arthrocnemum macrostachyum growing in the Odiel marshes (Spain) and emended descriptions of Halomonas xinjiangensis and Halomonas zincidurans. Int. J. Syst. Evol. Microbiol. 2020, 70, 220–227.
  96. Ferreira, M.J.; Cunha, A.; Figueiredo, S.; Faustino, P.; Patinha, C.; Silva, H.; Sierra-Garcia, I.N. The root microbiome of Salicornia ramosissima as a seedbank for plant-growth promoting halotolerant bacteria. Appl. Sci. 2021, 11, 2233.
  97. Oliva, G.; Di Stasio, L.; Vigliotta, G.; Guarino, F.; Cicatelli, A.; Castiglione, S. Exploring the potential of four novel halotolerant bacterial strains as plant-growth-promoting rhizobacteria (PGPR) under saline conditions. Appl. Sci. 2023, 13, 4320.
  98. Xiao, S.; Wan, Y.; Zheng, Y.; Wang, Y.; Fan, J.; Xu, Q.; Gao, Z.; Wu, C. Halomonas ventosae JPT10 promotes salt tolerance in foxtail millet (Setaria italica) by affecting the levels of multiple antioxidants and phytohormones. Plant Environ. Interact. 2023, 4, 275–290.
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