White Rot Fungi in Industrial Wastewater Treatment

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This entry is adapted from the peer-reviewed paper 10.3390/app13148318

White Rot Fungi (WRF) are a class of microorganisms widely understood for their ability to break down an extensive range of pollutants generally found in industrial wastewater. WRF usually carry out the degradation process with ligninolytic enzyme by targeting complex industrial pollutants, such as aromatic hydrocarbons, dyes, pharmaceuticals, and products of personal care. The unique enzymatic system of WRF converts the complex and harmful industrial pollutants into harmless end and byproducts, thus minimizing the impact on the environment and ecosystem.

White Rot Fungi wastewater treatment biodegradation bioremediation lignin-degrading enzymes industrial wastewater

1. Introduction

Although the rapid development of the industrial sector has contributed substantially to the world economy and human welfare, it has consequences in terms of waste generation, resource consumption, and energy use, which required the development of ad hoc strategies and countermeasures to contain their impacts ^[1]^[2]^[3]^[4]. Among the most impactful consequences related to human activities is the generation of huge volumes of wastewater, which is rich in a wide variety of pollutants and is liable for serious environmental pollution and public health risks ^[5]^[6]. The exact nature of pollutants being produced and released into the environment depends on the type of industry. The pollutants may be organic compounds, heavy metals, textile dyes, and any other persistent chemicals of environmental concern ^[7]. When these diverse pollutants are discharged into the environment, like in natural water bodies, they cause water pollution, which ultimately poses serious risks to aquatic life and public health ^[8]^[9]^[10].

The currently in-use traditional wastewater treatment methods, such as activated sludge process, coagulation, flocculation, and adsorption, have been used commonly to address issues associated with industrial wastewater pollution ^[11]^[12]^[13]. Although these conventional methods have been proven over time and again to be very effective in treating commonly occurring environmental pollutants, these methods are not effective in degrading industrial pollutants of a complex and recalcitrant nature, such as aromatic dyes and heavy metals. Apart from this bottleneck, these conventional methods produce a wide range of secondary pollutants during the process of degradation that are harmful to the environment ^[9].

The limitations of traditional wastewater treatment systems, such as the inability to degrade pollutants of a complex nature and the production of environmentally toxic byproducts, have led to the exploration of novel and innovative treatment methods. Most of the newly developed techniques employ biological methods, involving microorganisms because of their natural ability to biouptake and degrade pollutants of a complex nature ^[10]^[14]^[15]^[16]^[17]^[18]. Among a wide variety of microorganisms, White Rot Fungi (WRF) have recently gained substantial attention from scientists due to their exceptional ability to produce different extracellular lignin-degrading enzymes, such as lignin peroxidase, manganese peroxidase, and laccase. These extracellular enzymes enable WRF to degrade and mineralize industrial/environmental pollutants of a complex nature into less toxic or non-toxic compounds ^[19]. The extracellular enzyme-producing capability of WRF makes them an appealing candidate in the field of bioremediation to degrade complex/resistant pollutants emanating from different industries, such as the textile, paper and pulp, pharmaceutical, and/or agrochemical industries, etc. ^[20].

In the recent past, researchers have been focusing specifically on WRF’s biodegradation potential and its performance optimization, as well as WRF’s effective integration in already existing wastewater treatment facilities ^[21]. Mycoremediation involving White Rot Fungi (WRF) is a growing area of interest for researchers to address challenges associated with industrial wastewater treatment specifically involving complex organic pollutants and heavy metals. WRF fungi can offer effective wastewater treatment solutions at an industrial scale.

2. Merits of WRF-Based Alternative Treatment Techniques

Considering the limitations associated with conventional wastewater treatment methods, such as the inability of these techniques to degrade pollutants of a complex nature, high operating cost, and generation of secondary pollutants, there is an increasing demand for alternative wastewater treatment methods that can address all these limitations. This has led to the increasing interest of researchers in bioremediation, especially mycoremediation, such as the employment of White Rot Fungi, which provide a promising solution to all these issues.

2.1. Broad-Spectrum Biodegradation Capabilities

White Rot Fungi (WRF) are known for their distinctive capability to produce extracellular lignin-degrading enzymes, for example, manganese peroxidase, lignin peroxidase, and laccase. These extracellular enzymes help WRF oxidize and mineralize/degrade a vast variety of industrial pollutants, such as recalcitrant, resistant, and toxic compounds, which are not easily degradable by traditional wastewater treatment methods. Additionally, WRF can absorb and adsorb various heavy metals from industrial wastewater. These multidimensional and broad-spectrum capabilities of WRF to degrade and adsorb/absorb various industrial pollutants make them an ideal option for treatment ^[22].

2.2. Environmentally Sustainable Technology

Industrial pollutants degradation by White Rot Fungi (WRF)-based system is considered as an environmentally safe and sustainable approach, as WRFs rely on the natural process of degradation and adsorption/absorption, rather than intensive use of chemicals (flocculants and coagulants) and energy, which further adds to environmental problems in the form of secondary pollutants and greenhouse gases emissions ^[23].

2.3. Adaptability to Different Bioremediation Treatment Technologies

White Rot Fungi (WRF)-based wastewater treatment is very flexible, and it can be used in combination with other state-of-the-art bioremediation techniques, such as solid-state fermentation, submerged fermentation, immobilized fungal systems, and enzymatic treatment using isolated WRF enzymes. This flexibility grants the development of customized treatment systems to address the specialized needs of different industrial sectors and wastewater compositions ^[24]^[25].

2.4. Potential for Combined Conventional Treatment Approaches

WRF-based wastewater treatment systems can be combined with conventional treatment systems, such as the activated sludge process, Advanced Oxidation Process (AOP), or adsorption, to enhance the already present/designed wastewater treatment system. Combining this comparatively new and innovative technology with conventional methods will help overcome each technique’s limitations, resulting in a more thorough and effective treatment of industrial and otherwise resistant chemical pollutants ^[26]^[27].

Although WRF-based wastewater treatment systems have many advantages over conventional treatment methods, there are certain challenges that need to be addressed, such as enhancement of the technology for commercial and industrial applications ^[28], operational parameters optimization according to the need and type of industry, and assurance of cost-effectiveness. However, rigorous, and widely expanding research is currently being carried out on the degradation capabilities of White Rot Fungi (WRF), which will pave the way for this technology in industrial and commercial wastewater treatment in the near future ^[29].

3. White Rot Fungi: An Overview

White Rot Fungi (WRF) belong to the basidiomycetes group. These species are important in the degradation and natural decomposition of lignocellulosic material, like decayed wood and plant residues ^[30]. White Rot Fungi have the unique ability to naturally decompose the lignin, which is a complex and recalcitrant biopolymer. This unique ability of WRF has attracted the attention of researchers looking for alternatives to conventional wastewater treatment plants that are incapable of treating complex chemical pollutants ^[31].

3.1. Taxonomy and General Characteristics

Agaricomycetes is a class of Fungi within the Phylum Basidomycota, to which White Rot Fungi (WRF) belongs ^[32]. The most commonly and vastly studied genera of WRF are Phanerochaete, Trametes, Pleurotus, and Ganoderma. The Fungi from these genera are typically known and characterized by their capability to naturally decompose lignocellulosic material, including lignin, hemicellulose, and cellulose ^[30].

White Rot Fungi are filamentous fungi, typically characterized by thread-like structures known as hyphae. Hyphae, when combined, form a structure known as Mycelium. WRF usually exhibit sexual reproduction by producing basidiospores, produced by specialized fungal structures known as basidia ^[33]. As far as the habitats of WRF are concerned, these can be commonly found in environments like decaying wood, compost piles, and forest soils. In such environments, WRFs play an important role in nutrient cycling and carbon sequestration ^[34].

3.2. Lignin-Degrading Enzyme System

White Rot Fungi (WRF) are capable of producing extracellular lignin-degrading enzymes, like lignin peroxidase (LiP), manganese peroxidase (MnP), and laccase. The excellent natural decomposition (of recalcitrant industrial chemicals) properties of WRF are mainly due to these extracellular lignin-degrading enzymes. These enzymes speed up the process of lignin oxidation and depolymerisation, which further assist WRF to approach the hemicellulose and cellulose components of lignocellulosic materials for the sake of energy and nutrient incorporation ^[35]^[36].

Lignin Peroxidase (LiP): LiP, a heme-containing enzyme, acts as a catalyst for the oxidation of various aromatic and non-aromatic compounds. LiP has the capability to directly attack the lignin by breaking the C-C and C-O bonds present within the complex structure of lignin. High redox potential is a usual characteristic of the LiP enzyme. This characteristic permits LiP to naturally decompose and oxidize several recalcitrant pollutants, like PAHs, textile dyes, and many phenolic compounds ^[37].

Manganese Peroxidase (MnP): Another extracellular enzyme WRF produces is MnP. MnP is also a heme-containing enzyme, which assists in the oxidation of Mn(II) to Mn(III). In return, Mn(III) can degrade a variety of phenolic and non-phenolic compounds. Due to Mn(III) production, MnP can indirectly attack and degrade lignin through oxidation ^[38].

Laccase: Another extracellular multicopper oxidase enzyme produced by WRF is laccase. Laccase helps in speeding up the oxidation of phenolic and non-phenolic compounds, with the associated reduction of molecular oxygen to water. Although the redox potential of laccase is lower than the other two enzymes, i.e., MnP and LiP, the enzyme has the capability to degrade and oxidize a range of pollutants, such as phenols, textile dyes, and endocrine-disrupting compounds ^[38].

3.3. Non-Lignin-Degrading Enzyme System

Apart from the lignin-degrading enzymes in WRF, other non-lignin-degrading enzymes, such as cellobiose dehydrogenases, versatile peroxidases, and hydrolases, have been found to contribute to the transformation of diverse polluting substances. Cellobiose dehydrogenases play a role in the breakdown of cellulose and lignocellulosic biomass by generating reactive oxygen species. CDHs are capable of oxidizing cellobiose and other cello-oligosaccharides, freeing electrons that can be transported to various electron acceptors, including pollutants, accelerating their degradation ^[39]. Moreover, hydrolases are responsible for the hydrolysis of numerous pollutant compounds, such as Esters, Amides, Glycosides, Nitriles, Phosphates, and Sulphates ^[40].

Likewise, peroxidases, including versatile peroxidases (VPs) and manganese peroxidases (MnPs), have been identified to influence the degradation of diverse pollutants. VPs are able to oxidize a wide range of aromatic compounds, while MnPs demonstrate degrading ability towards lignin and recalcitrant pollutants ^[41]. VP shows a visible substrate specificity and can oxidize both high-redox-potential compounds, such as dyes, and low-redox-potential compounds, such as phenolic compounds and lignin ^[42].

3.4. Laccase Isozymes System

During laccase production, White Rot Fungi (WRF) have the notable capability to induce the production of laccase isozymes in the presence of xenobiotic substances/pollutants. These isozymes show similar enzymatic activities on mandatory laccases, but are specifically produced in response to the presence of hazardous substances ^[43].

When WRF encounter hazardous pollutants, like xenobiotics, they trigger a signaling cascade that leads to the activation of specific genes responsible for the synthesis of laccase isozymes ^[44]. These isozymes support the activity of laccases by increasing the range of substrates that can be treated and enhancing the overall degradation efficiency. The isozymes are involved in the degradation of many recalcitrant pollutants, such as polycyclic aromatic hydrocarbons (PAHs), pharmaceuticals, and other xenobiotics ^[45].

3.5. Mechanism of Pollution Degradation by WRF

As already discussed, White Rot Fungi are gaining attention to treat industrial wastewater containing various complex pollutants due to their ability to produce extracellular lignin-degrading enzymes ^[38]. Figure 1 shows WRF’s generic pollutants degradation mechanism.

Figure 1. Generic pollutants degradation mechanism of WRF.

3.5.1. Generation of Reactive Radicals

The extracellular lignin-degrading enzyme production by White Rot Fungi consists mainly of LiP and MnP. These two enzymes are responsible for producing reactive radicals with the assistance of redox reactions. These reactive radicals are non-specific oxidizing agents, which can degrade a range of complex and recalcitrant pollutants present in industrial wastewater. The reactive radicals carry out the oxidation of recalcitrant pollutants through several breakdown processes, including the removal of hydrogen atoms, chemical bond breakdown, and several other oxidative transformations ^[46]^[47].

3.5.2. Co-Metabolism and Cometabolites

During the process of co-metabolism, extracellular enzymes of WRF, along with the degradation and oxidation of lignin, can oxidize other pollutants without assimilating any energy or nutrients from the process. On the other hand, co-metabolites refer to the auxiliary or secondary products produced during the degradation of primary pollutants by WRF. These co-metabolites can enhance the lignin-degrading capability of WRF, which further facilitates the treatment of industrial wastewater pollutants ^[48].

3.5.3. Enzyme-Mediated Oxidation

Laccase is a multicopper oxidase enzyme, which can degrade a range of phenolic and non-phenolic compounds. Laccase has less redox potential than MnP and LiP, but its activity can be enhanced with the help of small molecules mediators, which can expand the range of substrates/pollutants that can be oxidized by the enzyme ^[49]. In fact, these mediators can transfer electrons between the enzyme and pollutants, thus facilitating the breakdown and oxidation of the pollutant ^[50].

The mediators generally applied in WRF-based bioremediation are the low-molecular-weight redox mediators, such as synthetic dyes and phenolic compounds ^[51]. These mediators act as electron shuttles, assisting the transfer of electrons between the enzymes and recalcitrant pollutants. They can accept electrons from the ligninolytic enzymes generated by WRF and transport them to the target pollutants, efficiently starting the degradation process.

The availability of mediators in the reaction medium has numerous valuable effects on enzymatic reactions. Firstly, mediators can directly work together with the enzymes to augment their stability and activity. By acting as electron carriers, mediators can reproduce the active form of enzymes and inhibit their inactivation due to oxidative damage ^[52]. This process permits the enzymes to effectively take part in the degradation of pollutants over prolonged periods. Secondly, mediators can broaden the range of pollutants that can be treated by WRF. A few recalcitrant pollutants, like polycyclic aromatic hydrocarbons (PAHs) and chlorinated compounds, are intrinsically resistant to direct enzymatic attack by WRF’s ligninolytic enzymes. However, the addition of mediators can overcome this limitation by allowing indirect degradation pathways. The mediators support the production of reactive radicals, like hydroxyl radicals, which can react with and treat recalcitrant pollutants ^[53].

The selection of appropriate mediators is essential for optimizing the bioremediation process. The selection of a mediator relies on the specific pollutants targeted for treatment and the enzymatic systems of the WRF species being employed. Various mediators may exhibit varying efficiencies and selectivity in increasing the degradation of specific pollutants.

3.5.4. Biosorption and Bioprecipitation

Apart from enzyme-based degradation and oxidation of recalcitrant pollutants, White Rot Fungi can employ the processes of biosorption and bioprecipitation to remove certain pollutants from industrial wastewater ^[54]. The fungal cell wall is usually filled with chitin and certain other polymers, which help the fungal cell wall to bind with and store metal ions and some other pollutants through several interactions, like electrostatic interactions, complexation, and ion exchange ^[55]. Additionally, WRF can alter the pH or redox conditions of the wastewater treatment system, which causes metal ions to precipitate as insoluble salts or hydroxides ^[56].

3.5.5. Acid-Based Bioremediation Mechanism

In addition to enzymes, acids, including oxalic acid, play a substantial role in the bioremediation of pollutants and the breakdown of xenobiotic compounds by White Rot Fungi (WRF).

An important characteristic of oxalic acid is its contribution in the chelation of metal ions. WRF, for example, Phanerochaete chrysosporium, are able to produce oxalic acid as a metabolic byproduct during the degradation of lignocellulosic materials. The produced oxalic acid can chelate with metal ions available in the environment, like iron, manganese, and copper ions ^[57]. This chelation process assists in mustering these metal ions and making them available for supplementary enzymatic reactions involved in the degradation of pollutants.

Likewise, the acidic circumstances generated by oxalic acid can accelerate the generation and activity of ligninolytic enzymes in WRF. The increased enzymatic activity under acidic pH conditions can induce the breakdown of complex pollutants, including aromatic hydrocarbons, dyes, and pharmaceuticals ^[58]^[59]. The mixed action of oxalic acid and ligninolytic enzymes permits the efficient breakdown and detoxification of these hazardous compounds.

3.6. Degradation of Industrial Pollutants by WRF

White Rot Fungi (WRF), due to their exceptional extracellular lignin-degrading enzymes producing ability, coupled with biosorption and bioprecipitation capabilities, have shown promising results in treating industrial wastewater pollutants of a complex nature ^[60].

In this section, the role of WRF in degrading various pollutants emanating from different industrial setups will be discussed.

3.6.1. Phenolic Compounds

Phenolic compounds are common pollutants in industrial wastewater originating from various industries, including textile, pulp and paper, and petrochemical ^[61]. Typical phenolic compounds are cresols, phenols, and chlorophenols, all of which can be easily degraded by WRF’s extracellular enzymes. These lignin enzymes produce reactive radicals that, in turn, oxidize and degrade phenolic compounds of various types into less toxic and simpler substances, or these enzymes can even mineralize these compounds into CO₂ and water ^[62].

3.6.2. Dyes and Textile Wastewater

The textile industry is rapidly growing worldwide. The industry generates large amounts of wastewater containing many synthetic dyes, mostly recalcitrant and toxic ^[63]. Common dyes in textile industry wastewater are Azo dyes, anthraquinone, and triphenylmethane dyes, which can be easily degraded by WRF’s extracellular enzymes, especially MnP and laccase ^[46]. In some cases, redox mediators can augment the enzymatic oxidation of dyes, resulting in quicker and more effective decolorization ^[64].

3.6.3. Pesticides and Agrochemicals

The foremost and major usage point of pesticides is the agricultural sector. These pesticides can contaminate waterbodies through surface water runoff or through percolation and leaching to underground water bodies ^[65]. The pesticides used in agricultural sectors are organochlorines, organophosphates, and carbamates. Most of the pesticides can easily be degraded by the WRF’s mechanism of extracellular enzyme production. These enzymes release reactive radicals that can cleave bonds present in pesticide molecules, thus transforming them into non-toxic or less toxic byproducts ^[66].

3.6.4. Pharmaceuticals and Personal Care Products

Due to their persistence in the environment and association with ecotoxicological impacts, Pharmaceuticals and Personal Care Products (PPCPs) have recently emerged as notable pollutants in industrial wastewater requiring immediate attention ^[67]. The most common PPCPs include, but are not limited to, antibiotics, hormones, and anti-inflammatory drugs. All these PPCPs can be degraded by WRF-produced extracellular lignin-degrading enzymes, coupled with the enhancement of the degradation efficiency by the induction of redox mediators ^[29].

3.6.5. Heavy Metals

In addition to degradation of organic pollutants, White Rot Fungi (WRF) play a considerable role in the remediation of heavy metal-contaminated environments.

WRF carry out heavy metals remediation by the process of biosorption. The fungal cell walls contain many functional groups, such as carboxyl, amino, and hydroxyl groups, which exhibit a high affinity for metal ions. These functional groups can bind to heavy metal ions available in the surrounding environment, leading to their sequestration and immobilization on the fungal biomass ^[68].

In addition to biosorption, WRF can employ enzymatic processes for the remediation of heavy metals. Specific enzymes released by WRF, such as laccases and peroxidases, are involved in the oxidation and reduction reactions of metal ions. Laccases participate in the oxidation of metal ions, leading to their precipitation or conversion into less toxic forms ^[43].

3.6.6. Other Pollutants

Apart from the industrial pollutants discussed in the previous section, White Rot Fungi can degrade and oxidize many other pollutants of environmental concern that cannot be treated by conventional wastewater treatment plants, including Poly Aromatic Hydrocarbons (PAHs), Poly Chlorinated Biphenyls (PCBs), and Endocrine-Disrupting Compounds (EDCs) ^[69]. The unique ability of WRF to produce lignin-degrading extracellular enzymes helps in degrading and oxidizing these compounds ^[46]^[47].

White Rot Fungi can degrade several industrial pollutants of a complex nature and can be an excellent option for wastewater treatment in the near future. However, in order to make practical and commercially viable WRF-based wastewater treatment systems, it is important to determine the optimized conditions for WRF and the factors that can affect the performance of these fungal species.

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