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Vélez, S.; Martínez-Peña, R.; Castrillo, D. Application of Vegetation Indices beyond Vegetation Monitoring. Encyclopedia. Available online: https://encyclopedia.pub/entry/47549 (accessed on 02 July 2024).
Vélez S, Martínez-Peña R, Castrillo D. Application of Vegetation Indices beyond Vegetation Monitoring. Encyclopedia. Available at: https://encyclopedia.pub/entry/47549. Accessed July 02, 2024.
Vélez, Sergio, Raquel Martínez-Peña, David Castrillo. "Application of Vegetation Indices beyond Vegetation Monitoring" Encyclopedia, https://encyclopedia.pub/entry/47549 (accessed July 02, 2024).
Vélez, S., Martínez-Peña, R., & Castrillo, D. (2023, August 02). Application of Vegetation Indices beyond Vegetation Monitoring. In Encyclopedia. https://encyclopedia.pub/entry/47549
Vélez, Sergio, et al. "Application of Vegetation Indices beyond Vegetation Monitoring." Encyclopedia. Web. 02 August, 2023.
Application of Vegetation Indices beyond Vegetation Monitoring
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Vegetation indices (VIs) have long been a crucial tool for monitoring plant growth and health, assessing the impact of environmental factors on vegetation, and supporting decision-making processes in agriculture and forestry. Traditionally, these mathematical formulations, leveraging the spectral response of plants to sunlight, have been instrumental in assessing vegetation health. However, emerging research suggests some unconventional applications that extend the scope of VIs.

precision agriculture satellite microbial terroir NDVI canopy structure vegetation indices soil reflectance crop health monitoring

1. Understanding Vegetation Indices

Vegetation indices are mathematical formulae that use the ratio of different wavelengths of light reflected by plants to estimate various vegetation characteristics. They are used in agriculture and forestry to monitor plant growth and health, as well as to assess the impact of environmental factors on vegetation. Several types of VIs exist, each with its own advantages and limitations. The concept of a vegetation index hinges on the distinctive ways that vegetation interacts with light. When sunlight strikes a plant, certain wavelengths are absorbed for photosynthesis, particularly in the blue (around 450 nm) and red (around 660 nm) parts of the spectrum. Conversely, the green (around 550 nm) and near-infrared (NIR, around 800 nm) light is reflected [1]. This characteristic spectral response is captured in the form of VIs.
VIs have become an indispensable tool in the fields of agriculture and forestry, providing a quantitative means of evaluating and monitoring plant health and growth [2]. VIs have traditionally been used to monitor crop and forest health and phenological changes, and to estimate biomass, providing vital information for managing agricultural and forestry resources [3]. In the realm of agriculture and forestry, they offer valuable information about plant health, growth, and productivity. These indices, such as the normalized difference vegetation index (NDVI), the soil-adjusted vegetation index (SAVI), and the enhanced vegetation index (EVI) among others, have been used to monitor and assess various aspects of vegetation health [4]. The key principle behind VIs lies in the distinct spectral response of plant vegetation in comparison to other natural materials, such as soil and water [5]. In this way, research has been conducted on a variety of VIs, each serving a unique purpose and offering different advantages depending on sensor type and field conditions [6].
The normalized difference vegetation index (NDVI), one of the most commonly used VIs, leverages this differential absorption and reflection. It is computed using the formula: NDVI = (NIR − Red)/(NIR + Red) [7]. NDVI values range between −1 and +1, with higher values indicating greater vegetation density and health [8]. The NDVI is particularly beneficial for monitoring large agricultural areas and forest canopies due to its sensitivity to chlorophyll content, but can be limited by soil and atmospheric noise, and saturation in high biomass areas [9]. Moreover, the NDVI has shown its potential for establishing sampling methodologies within the field [10], for crop management and zoning in accordance with crop vigor [11], for mapping phenology metrics [12], and for estimating wheat grain yields [13]. This has led to a growing interest in this specific VI, with more than 28,000 entries until 2022 in the Scopus database, surpassing the numbers of other VIs such as the EVI, SAVI, NDRE, and CWSI, whose combined entries do not reach this number.
To circumvent some of the limitations of the NDVI, other indices such as the soil-adjusted vegetation index (SAVI) have been developed. The SAVI introduces a soil brightness correction factor (L) into the NDVI formula to minimize soil noise, making it useful in areas with sparse vegetation [14]. The formula for the SAVI is: SAVI = [(NIR − Red)/(NIR + Red + L)] × (1 + L). The normalized difference red edge (NDRE) index is another important VI that has been specifically designed to be sensitive to chlorophyll content in higher biomass areas, where the NDVI tends to saturate. The NDRE is calculated using the formula: NDRE = (NIR − RedEdge)/(NIR + RedEdge), where RedEdge refers to the spectral band around 730 nm [15]. The enhanced vegetation index (EVI) is another modification of the NDVI that aims to optimize the vegetation signal in high biomass regions and improve sensitivity to atmospheric and canopy background conditions. The formula for the EVI is: EVI = G × [(NIR − Red)/(NIR + C1 × Red − C2 × Blue + L)], where G, C1, C2, and L are constants [9].
The canopy chlorophyll content index (CCCI) and the crop water stress index (CWSI) are indices that provide more specific insights. The CCCI, calculated as NDRE/NDVI, is a measure of the chlorophyll content per unit area of the canopy [16][17] and uses reflectance in the near-infrared (NIR) and red spectral regions to compensate for changes in canopy density. Its significance lies in its ability to detect relative changes in canopy chlorophyll or nitrogen content, making it a useful tool for monitoring plant health and fertility [18]. Meanwhile, the CWSI, calculated based on canopy temperature and atmospheric conditions, estimates water stress in crops and is a measure of the relative transpiration rate occurring from a plant at the time of measurement. It is calculated by using a measure of the canopy temperature of a plant (TC) and the vapor pressure deficit (VPD), which is a measurement of the dryness of the air [19][20]. Given its basis in canopy temperature and transpiration rates through baselines [21], the CWSI is a powerful tool for assessing water stress in crops, and thus for informing irrigation planning and management.
Finally, the visible atmospherically resistant index (VARI) is another noteworthy index designed to emphasize vegetation in the visible portion of the spectrum while mitigating illumination differences and atmospheric effects. It is particularly useful for RGB or color images and utilizes all three color bands [22]. The equation to calculate VARI is as VARI = (Green − Red)/(Green + Red − Blue) where green, red, and blue refer to the pixel values from the corresponding color bands of an image.
The different VIs, as described above, have their specific advantages and limitations. They offer a range of tools for measuring different aspects of vegetation, each with unique applications in agriculture and forestry. However, it is crucial to note that the performance and usefulness of these indices can be influenced by a multitude of factors, such as the type of vegetation, geographical location, time of year, and atmospheric conditions. Additionally, the application of these indices requires careful calibration and interpretation, given the complexity of the processes they are designed to represent. Furthermore, despite the evident utility of these indices for vegetation assessment purposes, a review of the literature reveals a gap in research with respect to exploring non-traditional uses of VIs in forestry and agriculture. For instance, studies investigating the role of these indices in climate-change studies, disaster management, and the study of microorganisms and yeasts in relation to agriculture are lacking.

2. Unlocking New Horizons: Leveraging Vegetation Indices for Innovative and Diverse Applications beyond Vegetation Monitoring

In recent times, remote-sensing technology has experienced an upsurge in its applications, extending beyond the conventional scope of vegetation monitoring (Table 1). New studies have expanded the use of these indices, applying them in novel contexts beyond vegetation assessment within agriculture and forestry, such as the assessment of habitat conditions for wildlife conservation [23] or the effective detection of aquatic plants [24]. This showcases the versatility of VIs in research domains other than the conventional. Some of the novel domains encompassing the use of remote sensing include studies on climate change, disaster management, and microorganism assessment, among other applications that are not directly associated with vegetation assessment. On the other hand, certain applications such as quality assessment are more intrinsically linked to plant health and vegetation status and have been more extensively utilized.
Table 1. Vegetation indices for innovative and diverse applications beyond vegetation monitoring.

2.1. Climate Change

Climate change represents one of the most profound challenges facing the agricultural sector. The shifts in temperature, rainfall patterns, and the frequency of extreme weather events have significant impacts on crop productivity [59]. VIs provide essential insights into plant response to varying climatic conditions, making them invaluable in climate-change studies as a powerful tool for studying climate-change effects on agriculture and forestry. Moreover, VIs are correlated with climate variables such as precipitation and temperature, establishing them as significant indicators of climate-change effects on terrestrial ecosystems [3]. VIs, such as the normalized difference vegetation index (NDVI), have been used to monitor vegetation dynamics and their relationship with climate factors such as precipitation [25]. For example, a significant correlation was found between the NDVI, temperature, and precipitation trends in the Tibetan Plateau, highlighting the potential of the NDVI as an indicator of climate change [26]. Moreover, the NDVI has been widely used to track climate-change impacts on crop phenology and productivity [27] and has been used as a proxy to assess changes in plant phenology and productivity in response to climate change [8]. The enhanced vegetation index (EVI), which is sensitive to canopy structural variations, has played a pivotal role in climate-change studies by being utilized to assess the effects of climate change in the Amazon Basin, thereby furnishing scientific evidence of climate change’s impact and supplying information to local government bodies that is instrumental in shaping policy decisions geared towards the protection of the Amazon Basin [28]. Other indices like the SAVI has proven to be an effective index for mapping soil moisture in cultivated agricultural areas that range from bare soil to dense vegetation, aiding in mitigating the water crisis in arid and semi-arid regions worldwide, a situation expected to intensify due to the rapidly increasing human population and the evolving global climate [29]. In addition, air pollution, a key factor linked to climate change that has an impact on people’s quality of life and can be controlled through vegetation [60], can distort the precision of several vegetation indices in areas with considerable atmospheric aerosol presence, underlining the critical importance of accounting for atmospheric particulate pollution in such evaluations [30].

2.2. Organic Production

Organic agriculture is posited as a viable alternative for mitigating the environmental repercussions of agronomic production while bolstering biodiversity. One of the salient constraints in organic agriculture is weed proliferation, the management of which is crucial, yet challenging, for ensuring optimal yields. Through NDVI cluster analysis, the spatial and temporal heterogeneity of crops can be discerned in the early stages, thereby furnishing strategic insights for agricultural management geared towards enhancing the yield quality in organic production [31][32]. Furthermore, the incorporation of deleterious chemicals, particularly in the form of pesticides, in agricultural production poses substantial risks to consumers. Such chemicals are not permissible in organic farming practices. The NDVI offers the capacity to detect phytochemicals or their concomitant effects, such as herbicides in organic agriculture, thereby facilitating adherence to certification audits and ensuring the maintenance of safe pesticide thresholds in conventional agricultural practices [33][34][35]. In a parallel vein, an investigation [36] was carried out to study the potential of the NDVI in augmenting the traceability of organic produce through the integration of machine learning. This is especially pertinent in the context of organic agriculture, which necessitates the adoption of non-chemical weed abatement, crop rotation, and sustainable fertilization and water-management protocols.

2.3. Disaster Management

The applicability of VIs in disaster management, especially in agricultural landscapes, is gaining attention. For instance, VIs such as the normalized difference water index (NDWI) [61], which has been specifically developed for remote sensing of vegetation liquid water from space, have proven effective in detecting flood-affected areas [37], while the burn area index (BAI), has been used to identify areas affected by wildfires [38]. The quick and accurate detection of disaster-stricken regions allows for efficient disaster response and recovery, minimizing the impact on agricultural productivity. The crop water stress index (CWSI), initially developed for irrigation scheduling, has been used to predict drought conditions, proving to be a reliable indicator for assessing and monitoring regional droughts [39]. The ability to forecast droughts can guide mitigation measures, minimizing crop losses. Besides, the difference in vegetation response before and after a disaster, captured by indices like the NDVI and EVI, can be used for rapid damage assessment post-disaster [40]. This application extends to the forestry sector where VIs aid in monitoring and mapping wildfire damages and post-fire recovery [41].

2.4. Microorganisms and Yeasts

Interestingly, the use of VIs is not limited to large-scale agricultural and forest monitoring. Recent research has shown the potential of these indices in studying microorganisms and yeasts that have significant impacts on agricultural productivity. For instance, the NDVI has been used to detect fungal infections in crops, a challenging task due to the minute scale of the pathogens [42][43]. Moreover, it can function as a marker for measuring plant weight and the commencement of enzymatic activities linked to the induction of plant defense mechanisms [44]. Ref. [45] studied the interaction of climate, topography, and soil properties with cropland using MODIS-NDVI product data and machine learning methods. Ref. [46] employed fluorescence, thermography, and NDVI techniques in lettuce to identify the presence of Rhizoctonia solani infection, revealing that in certain instances, infected plants were detected prior to the manifestation of visible symptoms. Similarly, the use of VIs in detecting yeasts, particularly those involved in fermentation processes in the wine industry, has been explored. Yeasts, essential to the fermentation process, significantly influence the taste and quality of the wine. Ref. [47] have indicated that satellite multispectral imaging, through the NDVI, could potentially be used to monitor microbial terroir and yeast species richness within the vineyards. This result was confirmed in a subsequent study, finding that satellite imagery can differentiate yeasts according to their fermentative capacity and could serve as a valuable asset for managing wine differentiation and a decision-making resource for designation of origin (DO) regulators and viticulturists [48]. These novel applications could offer a non-invasive method for winemakers to improve knowledge of the microbial status of the local terroir, thus improving product distinction, quality, and added value. Furthermore, accurate assessment of soil conditions and crop health is crucial for identifying and addressing issues like pollution and soil-borne diseases. VIs can be helpful in this task and images have the potential of detecting changes in soil microbial community composition. Ref. [49] found in winter wheat that hyperspectral reflectance can detect the presence of aggressive soil pathogens and their patterns differed significantly based on geographical distance and microbial species loss. Moreover, they found a positive correlation between the NDVI and bacterial species richness.

2.5. Quality Assessment

Although VIs have traditionally been used to monitor crop and forest vegetation, other traditional uses were the assessment of the quality of the production. Quality assessment through remote sensing is instrumental in monitoring plant stress and status, which impacts several aspects of fruit or grain production such as weight, composition, or nutrient levels. Thus, Ref. [50] used RGB drone imagery to correlate VIs with wine-quality variables, finding significant correlations and suggesting that conventional digital imagery can enhance wine production management and productivity by providing insights into critical quality variables. In addition, Ref. [11] found significant differences between vigor and quality parameters in grapes and also in wine. Finally, several relationships between VIs and crop quality have been identified not only in woody crops but also in other types of crops such as cereals [51].

2.6. Leaf Area and Photosynthetically Active Radiation (PAR)

Leaf area, photosynthetically active radiation (PAR), FPAR (fraction of PAR), and FAPAR (fraction of absorbed PAR by a vegetation canopy) are critical biophysical parameters of crops and ecosystems and, although they are not VIs in the strictest sense, rely on similar principles and can be estimated using VIs [62]. FAPAR and FPAR are similar but slightly different. Both are measures used in vegetation studies, but FAPAR represents the fraction of incoming photosynthetically active radiation absorbed by vegetation, indicating its photosynthetic ability, and FPAR represents the fraction of incoming photosynthetically active radiation that is intercepted by vegetation. FPAR and the NDVI have a clear relationship that is independent of pixel heterogeneity [63]. On the other hand, Ref. [52] showed a strong linear relationship between the satellite-derived NDVI time series and the leaf area of the crop, suggesting that satellite NDVI can effectively detect the evolution of the NDVI within a crop. Therefore, VIs are instrumental in the calculation of leaf area index (LAI), a common index to evaluate the leaf area of the plant and closely related to FAPAR [64][65]. The LAI, which represents the total one-sided area of leaf tissue per ground surface area, provides information about canopy structure and plant vigor. Methods that determine the radiation intercepted by the plant to estimate the LAI have been developed [54]. Ref. [66] found that the correlation between the NDVI and LAI can change throughout different seasons and from year to year, aligning with the fluctuations in the phenological growth of trees and in response to temporal changes in environmental factors. Therefore, it is possible to establish a relationship between the leaf area and the VIs, such as the NDVI. In this sense, Ref. [53] evaluated various methods for estimating corn LAI in northeastern China using hyperspectral reflectance data, computing several indices like the NDVI and EVI. Ref. [55] employed satellite-derived NDVI and proposed a regional-scale method for accurately estimating rice LAI during the growing period, and Ref. [56] focused their research in the semi-arid grassland of Inner Mongolia, formulating specific equations to estimate the leaf area index (LAI) within the typical vegetation range observed during the growing season. However, these equations vary from one area to another, and it is very important to select the appropriate NDVI-LAI equation, or a combination of equations, based on the trade-off between the scale of the research and the availability of data [57]. Nevertheless, the NDVI suffers from saturation at high density canopies and recently other VIs have been proposed to improve LAI estimations [58].

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