Your browser does not fully support modern features. Please upgrade for a smoother experience.
Submitted Successfully!
Thank you for your contribution! You can also upload a video entry or images related to this topic. For video creation, please contact our Academic Video Service.
Version Summary Created by Modification Content Size Created at Operation
1 handwiki Vivi Li -- 1622 2022-11-29 01:48:40

Video Upload Options

We provide professional Academic Video Service to translate complex research into visually appealing presentations. Would you like to try it?
No, upload directly Yes
Cite
If you have any further questions, please contact Encyclopedia Editorial Office.
HandWiki. List of Folding@home Cores. Encyclopedia. Available online: https://encyclopedia.pub/entry/36942 (accessed on 02 October 2026).
HandWiki. List of Folding@home Cores. Encyclopedia. Available at: https://encyclopedia.pub/entry/36942. Accessed October 02, 2026.
HandWiki. "List of Folding@home Cores" Encyclopedia, https://encyclopedia.pub/entry/36942 (accessed October 02, 2026).
HandWiki. (2022, November 29). List of Folding@home Cores. In Encyclopedia. https://encyclopedia.pub/entry/36942
HandWiki. "List of Folding@home Cores." Encyclopedia. Web. 29 November, 2022.
List of Folding@home Cores
Edit
The content is sourced from: https://handwiki.org/wiki/Physics:List_of_Folding@home_cores

The distributed-computing project Folding@home uses scientific computer programs, referred to as "cores" or "fahcores", to perform calculations. Folding@home's cores are based on modified and optimized versions of molecular simulation programs for calculation, including TINKER, GROMACS, AMBER, CPMD, SHARPEN, ProtoMol and Desmond. These variants are each given an arbitrary identifier (Core xx). While the same core can be used by various versions of the client, separating the core from the client enables the scientific methods to be updated automatically as needed without a client update.

molecular simulation folding@home protomol

References

  1. "Folding@home Project Summary". https://apps.foldingathome.org/psummary. Retrieved 2019-09-15. 
  2. "CPU FAH core with AVX support? Mentioned a while back?". 2016-11-07. https://foldingforum.org/viewtopic.php?f=72&t=28119&start=15. Retrieved 2017-02-18. 
  3. "New Client with ARM Support". 24 November 2020. https://foldingathome.org/2020/11/24/new-client-with-arm-support/. 
  4. Vijay Pande (2011). "ATI FAQ: Are these WUs compatible with other fahcores?" (FAQ). Archived from the original on 2012-10-28. https://web.archive.org/web/20121028125028/http://folding.stanford.edu/English/FAQ-ATI. Retrieved 2011-08-23. 
  5. Vijay Pande (2009). "Update on new FAH cores and clients". http://folding.typepad.com/news/2009/09/update-on-new-fah-cores-and-clients.html. Retrieved 2011-08-23. 
  6. "GPU CORE22 0.0.2 coming to ADVANCED". https://foldingforum.org/viewtopic.php?f=24&t=32070. Retrieved 2020-02-14. 
  7. "core22 0.0.20 limited testing with project 17110". https://foldingforum.org/viewtopic.php?f=24&t=37700. Retrieved 2021-01-14. 
  8. "TINKER Home Page". http://dasher.wustl.edu/tinker/. Retrieved 2012-08-24. 
  9. "Tinker Core". 2011. http://fahwiki.net/index.php/Cores#Tinker_core. Retrieved 2012-08-24. 
  10. "Folding@home on ATI's GPUs: a major step forward". 2011. Archived from the original on 2012-10-28. https://web.archive.org/web/20121028125028/http://folding.stanford.edu/English/FAQ-ATI. Retrieved 2011-08-28. 
  11. "GPU core". 2011. http://fahwiki.net/index.php/Cores#GPU_core. Retrieved 2011-08-28. 
  12. "Gromacs FAQ" (FAQ). 2007. Archived from the original on 2012-07-17. https://web.archive.org/web/20120717063443/http://folding.stanford.edu/English/FAQ-gromacs. Retrieved 2011-09-03. 
  13. "SMP FAQ" (FAQ). 2011. Archived from the original on 2012-09-22. https://web.archive.org/web/20120922013529/http://folding.stanford.edu/English/FAQ-SMP. Retrieved 2011-08-22. 
  14. "Gromacs SMP core". 2011. http://fahwiki.net/index.php/Cores#Gromacs_SMP_core. Retrieved 2011-08-28. 
  15. "Gromacs CVS SMP core". 2011. http://fahwiki.net/index.php/Cores#Gromacs_CVS_SMP_core. Retrieved 2011-08-28. 
  16. "New release: extra-large work units". 2011. http://foldingforum.org/viewtopic.php?f=24&t=10697. Retrieved 2011-08-28. 
  17. "PS3 Screenshot". 2007. http://www.stanford.edu/group/pandegroup/folding/pics/shot-00007.jpg. Retrieved 2011-08-24. 
  18. "PS3 Client". 2008. http://fahwiki.net/index.php/PS3_client. Retrieved 2011-08-28. 
  19. "PS3 FAQ". 2009. http://folding.stanford.edu/English/FAQ-PS3. Retrieved 2011-08-28. 
  20. "Gromacs Core". 2011. http://fahwiki.net/index.php/Cores#Gromacs_core. Retrieved 2011-08-21. 
  21. "Gromacs 33 Core". 2011. http://fahwiki.net/index.php/Cores#Gromacs_33_core. Retrieved 2011-08-21. 
  22. "Gromacs SREM Core". 2011. http://fahwiki.net/index.php/Cores#Gromacs_SREM_core. Retrieved 2011-08-24. 
  23. Sugita, Yuji; Okamoto, Yuko (1999). "Replica-exchange molecular dynamics method for protein folding". Chemical Physics Letters 314 (1–2): 141–151. doi:10.1016/S0009-2614(99)01123-9. Bibcode: 1999CPL...314..141S.  https://dx.doi.org/10.1016%2FS0009-2614%2899%2901123-9
  24. "Gromacs Simulated Tempering core". 2011. http://fahwiki.net/index.php/Cores#Gromacs_Simulated_Tempering_core. Retrieved 2011-08-24. 
  25. "Double Gromacs Core". 2011. http://fahwiki.net/index.php/Cores#Double_Gromacs_core. Retrieved 2011-08-22. 
  26. "Double Gromacs B Core". 2011. http://fahwiki.net/index.php/Cores#Double_Gromacs_B_core. Retrieved 2011-08-22. 
  27. "Double Gromacs C Core". 2011. http://fahwiki.net/index.php/Cores#Double_Gromacs_C_core. Retrieved 2011-08-22. 
  28. "GB Gromacs". 2011. http://fahwiki.net/index.php/Cores#GB_Gromacs_core. Retrieved 2011-08-22. 
  29. "Folding Forum • View topic - Public Release of New A4 Cores". http://foldingforum.org/viewtopic.php?f=24&t=17528. 
  30. "Folding Forum • View topic - Project 7600 Adv -> Full FAH". http://foldingforum.org/viewtopic.php?f=24&t=18887#p189345. 
  31. "Project 10412 now on advanced". 2010. http://foldingforum.org/viewtopic.php?p=160829#p160829. Retrieved 2011-09-03. 
  32. "Gromacs CVS SMP2 Core". 2011. http://fahwiki.net/index.php/Cores#Gromacs_SMP2_core. Retrieved 2011-08-22. 
  33. kasson (2011-10-11). "Re: Project:6099 run:3 clone:4 gen:0 - Core needs updating". http://foldingforum.org/viewtopic.php?f=19&t=19802#p197041. Retrieved 2011-10-11. 
  34. "Gromacs CVS SMP2 bigadv Core". 2011. http://fahwiki.net/index.php/Cores#Gromacs_SMP2_bigadv_core. Retrieved 2011-08-22. 
  35. "Introduction of a new SMP core, changes to bigadv". 2011. http://folding.typepad.com/news/2011/03/introduction-of-a-new-smp-core-changes-to-bigadv.html. Retrieved 2011-08-24. 
  36. R. Car; M. Parrinello (1985). "Unified Approach for Molecular Dynamics and Density-Functional Theory". Phys. Rev. Lett. 55 (22): 2471–2474. doi:10.1103/PhysRevLett.55.2471. PMID 10032153. Bibcode: 1985PhRvL..55.2471C.  https://dx.doi.org/10.1103%2FPhysRevLett.55.2471
  37. "QMD FAQ" (FAQ). 2007. http://folding.stanford.edu/English/FAQ-QMD. Retrieved 2011-08-28. 
  38. "QMD Core". 2011. http://fahwiki.net/index.php/Cores#QMD_core. Retrieved 2011-08-24. 
  39. "FAH & QMD & AMD64 & SSE2" (FAQ). http://fahwiki.net/index.php/FAH_&_QMD_&_AMD64_&_SSE2. 
  40. "SHARPEN". Archived from the original on December 2, 2008. https://web.archive.org/web/20081202015556/http://p450.caltech.edu/sharpen/sharpenprojects.html. 
  41. "SHARPEN: Systematic Hierarchical Algorithms for Rotamers and Proteins on an Extended Network (deadlink)" (About). Archived from the original on December 1, 2008. https://web.archive.org/web/20081201052516/http://p450.caltech.edu/sharpen/sharpenabout.html. 
  42. "Re: SHARPEN". 2010. http://foldingforum.org/viewtopic.php?f=16&t=13467&p=131478#p131463. Retrieved 2011-08-29. 
  43. Kevin J. Bowers; Edmond Chow; Huafeng Xu; Ron O. Dror; Michael P. Eastwood; Brent A. Gregersen; John L. Klepeis; István Kolossváry et al. (2006). "Scalable Algorithms for Molecular Dynamics Simulations on Commodity Clusters". ACM/IEEE SC 2006 Conference (SC'06). ACM. pp. 43. doi:10.1109/SC.2006.54. ISBN 0-7695-2700-0. http://sc06.supercomputing.org/schedule/pdf/pap259.pdf. 
  44. Morten Ø. Jensen; David W. Borhani; Kresten Lindorff-Larsen; Paul Maragakis; Vishwanath Jogini; Michael P. Eastwood; Ron O. Dror; David E. Shaw (2010). "Principles of Conduction and Hydrophobic Gating in K+ Channels". Proceedings of the National Academy of Sciences of the United States of America (PNAS) 107 (13): 5833–5838. doi:10.1073/pnas.0911691107. PMID 20231479. Bibcode: 2010PNAS..107.5833J.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2851896
  45. Ron O. Dror; Daniel H. Arlow; David W. Borhani; Morten Ø. Jensen; Stefano Piana; David E. Shaw (2009). "Identification of Two Distinct Inactive Conformations of the ß2-Adrenergic Receptor Reconciles Structural and Biochemical Observations". Proceedings of the National Academy of Sciences of the United States of America (PNAS) 106 (12): 4689–4694. doi:10.1073/pnas.0811065106. PMID 19258456. Bibcode: 2009PNAS..106.4689D.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2650503
  46. Yibing Shan; Markus A. Seeliger; Michael P. Eastwood; Filipp Frank; Huafeng Xu; Morten Ø. Jensen; Ron O. Dror; John Kuriyan et al. (2009). "A Conserved Protonation-Dependent Switch Controls Drug Binding in the Abl Kinase". Proceedings of the National Academy of Sciences of the United States of America (PNAS) 106 (1): 139–144. doi:10.1073/pnas.0811223106. PMID 19109437. Bibcode: 2009PNAS..106..139S.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2610013
  47. Kevin J. Bowers; Ron O. Dror; David E. Shaw (2006). "The Midpoint Method for Parallelization of Particle Simulations". Journal of Chemical Physics (J. Chem. Phys.) 124 (18): 184109:1–11. doi:10.1063/1.2191489. PMID 16709099. Bibcode: 2006JChPh.124r4109B. http://scitation.aip.org/getabs/servlet/GetabsServlet?prog=normal&id=JCPSA6000124000018184109000001&idtype=cvips&gifs=yes. 
  48. Ross A. Lippert; Kevin J. Bowers; Ron O. Dror; Michael P. Eastwood; Brent A. Gregersen; John L. Klepeis; István Kolossváry; David E. Shaw (2007). "A Common, Avoidable Source of Error in Molecular Dynamics Integrators". Journal of Chemical Physics (J. Chem. Phys.) 126 (4): 046101:1–2. doi:10.1063/1.2431176. PMID 17286520. Bibcode: 2007JChPh.126d6101L. http://scitation.aip.org/getabs/servlet/GetabsServlet?prog=normal&id=JCPSA6000126000004046101000001&idtype=cvips&gifs=yes. 
  49. Edmond Chow; Charles A. Rendleman; Kevin J. Bowers; Ron O. Dror; Douglas H. Hughes; Justin Gullingsrud; Federico D. Sacerdoti; David E. Shaw (2008). Desmond Performance on a Cluster of Multicore Processors. D. E. Shaw Research Technical Report DESRES/TR--2008-01, July 2008. http://deshawresearch.com/publications.html. 
  50. "Desmond core". http://fahwiki.net/index.php/Cores#Desmond_core. Retrieved 2011-08-24. 
  51. "Amber". 2011. http://ambermd.org. Retrieved 2011-08-23. 
  52. "Amber Developers". 2011. http://ambermd.org/#acknowledgments. Retrieved 2011-08-23. 
  53. "AMBER Core". 2011. http://fahwiki.net/index.php/Cores#AMBER_core. Retrieved 2011-08-23. 
  54. "Folding@Home with AMBER FAQ" (FAQ). 2004. http://www.stanford.edu/group/pandegroup/folding/AMBER.html. Retrieved 2011-08-23. 
  55. "ProtoMol". http://protomol.sourceforge.net/. Retrieved 2011-08-24. 
  56. "Folding@home - About" (FAQ). 2010-07-26. http://folding.stanford.edu/English/About. 
  57. "ProtoMol core". 2011. http://fahwiki.net/index.php/Cores#ProtoMol_core. Retrieved 2011-08-24. 
  58. "GPU2 Core". 2011. http://fahwiki.net/index.php/Cores#GPU2_core. Retrieved 2011-08-23. 
  59. "FAH Support for ATI GPUs". 2011. http://folding.typepad.com/news/2011/03/fah-support-for-ati-gpus.html. Retrieved 2011-08-31. 
  60. ihaque (Pande Group member) (2009). "Folding Forum: Announcing project 5900 and Core_14 on advmethods". http://foldingforum.org/viewtopic.php?f=52&t=8734&start=0. Retrieved 2011-08-23. 
  61. "GPU3 Core". 2011. http://fahwiki.net/index.php/Cores#GPU3_core. Retrieved 2011-08-23. 
  62. "GPU Core 17". 2014. http://folding.typepad.com/news/2013/06/welcome-to-fahcore-17.html. Retrieved 2014-07-12. 
  63. "Core 18 and Maxwell". http://foldingforum.org/viewtopic.php?f=16&t=26980&start=16. Retrieved 19 February 2015. 
  64. "Core18 Projects 10470-10473 to FAH". http://foldingforum.org/viewtopic.php?f=24&t=26732. Retrieved 19 February 2015. 
  65. "New Core18 (login required)". http://foldingforum.org/viewtopic.php?f=66&t=26528. Retrieved 19 February 2015. 
  66. "Core 21 v0.0.11 moving to FAH with p9704, p9712". https://foldingforum.org/viewtopic.php?f=24&t=28010. Retrieved 2019-09-18. 
More
©Text is available under the terms and conditions of the Creative Commons-Attribution ShareAlike (CC BY-SA) license; additional terms may apply. By using this site, you agree to the Terms and Conditions and Privacy Policy.
Upload a video for this entry
Information
Subjects: Others
Contributor MDPI registered users' name will be linked to their SciProfiles pages. To register with us, please refer to https://encyclopedia.pub/register :
HandWiki
View Times: 1.4K
Entry Collection: HandWiki
Revision: 1 time (View History)
Update Date: 29 Nov 2022
Table of Contents
    Notice
    You are not a member of the advisory board for this topic. If you want to update advisory board member profile, please contact office@encyclopedia.pub.
    OK
    Confirm
    Only members of the Encyclopedia advisory board for this topic are allowed to note entries. Would you like to become an advisory board member of the Encyclopedia?
    Yes
    No
    ${ textCharacter }/${ maxCharacter }
    Submit
    Cancel
    There is no comment~
    ${ textCharacter }/${ maxCharacter }
    Submit
    Cancel
    ${ selectedItem.replyTextCharacter }/${ selectedItem.replyMaxCharacter }
    Submit
    Cancel
    Confirm
    Are you sure to Delete?
    Yes No
    Academic Video Service
    Feedback