Your browser does not fully support modern features. Please upgrade for a smoother experience.
Submitted Successfully!
Thank you for your contribution! You can also upload a video entry or images related to this topic. For video creation, please contact our Academic Video Service.
Version Summary Created by Modification Content Size Created at Operation
1 handwiki Sirius Huang -- 1354 2022-11-28 01:38:53

Video Upload Options

We provide professional Academic Video Service to translate complex research into visually appealing presentations. Would you like to try it?
No, upload directly Yes
Cite
If you have any further questions, please contact Encyclopedia Editorial Office.
HandWiki. European Nucleotide Archive. Encyclopedia. Available online: https://encyclopedia.pub/entry/36852 (accessed on 24 September 2026).
HandWiki. European Nucleotide Archive. Encyclopedia. Available at: https://encyclopedia.pub/entry/36852. Accessed September 24, 2026.
HandWiki. "European Nucleotide Archive" Encyclopedia, https://encyclopedia.pub/entry/36852 (accessed September 24, 2026).
HandWiki. (2022, November 28). European Nucleotide Archive. In Encyclopedia. https://encyclopedia.pub/entry/36852
HandWiki. "European Nucleotide Archive." Encyclopedia. Web. 28 November, 2022.
European Nucleotide Archive
Edit
The content is sourced from: https://handwiki.org/wiki/Biology:European_Nucleotide_Archive

The European Nucleotide Archive (ENA) is a repository providing free and unrestricted access to annotated DNA and RNA sequences. It also stores complementary information such as experimental procedures, details of sequence assembly and other metadata related to sequencing projects. The archive is composed of three main databases: the Sequence Read Archive, the Trace Archive and the EMBL Nucleotide Sequence Database (also known as EMBL-bank). The ENA is produced and maintained by the European Bioinformatics Institute and is a member of the International Nucleotide Sequence Database Collaboration (INSDC) along with the DNA Data Bank of Japan and GenBank. The ENA has grown out of the EMBL Data Library which was released in 1982 as the first internationally supported resource for nucleotide sequence data. As of early 2012, the ENA and other INSDC member databases each contained complete genomes of 5,682 organisms and sequence data for almost 700,000. Moreover, the volume of data is increasing exponentially with a doubling time of approximately 10 months.

nucleotide sequence nucleotide embl-bank

References

  1. Hamm, G. H.; Cameron, G. N. (1986). "The EMBL data library". Nucleic Acids Research 14 (1): 5–9. doi:10.1093/nar/14.1.5. PMID 3945550.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=339348
  2. Kneale, G.; Kennard, O. (1984). "The EMBL nucleotide sequence data library". Biochemical Society Transactions 12 (6): 1011–1014. doi:10.1042/bst0121011. PMID 6530028.  https://dx.doi.org/10.1042%2Fbst0121011
  3. Cameron, G. N. (1988). "The EMBL data library". Nucleic Acids Research 16 (5): 1865–1867. doi:10.1093/nar/16.5.1865. PMID 3353226.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=338182
  4. Fuchs, R.; Stoehr, P.; Rice, P.; Omond, R.; Cameron, G. (1990). "New services of the EMBL Data Library". Nucleic Acids Research 18 (15): 4319–4323. doi:10.1093/nar/18.15.4319. PMID 2388823.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=331247
  5. Kahn, P.; Hazledine, D. (1988). "NAR's new requirement for data submission to the EMBL data library: Information for authors". Nucleic Acids Research 16 (10): I-IV. PMID 16617480.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=336623
  6. "What is the European Nucleotide Archive?". EMBL-EBI. http://www.ebi.ac.uk/training/online/course/european-nucleotide-archive-quick-tour/what-european-nucleotide-archive. Retrieved 2013-01-06. 
  7. Rodriguez-Tomé, P.; Stoehr, P. J.; Cameron, G. N.; Flores, T. P. (1996). "The European Bioinformatics Institute (EBI) databases". Nucleic Acids Research 24 (1): 6–12. doi:10.1093/nar/24.1.6. PMID 8594602.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=145572
  8. Cochrane, G.; Akhtar, R.; Aldebert, P.; Althorpe, N.; Baldwin, A.; Bates, K.; Bhattacharyya, S.; Bonfield, J. et al. (2007). "Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database". Nucleic Acids Research 36 (Database): D5–D12. doi:10.1093/nar/gkm1018. ISSN 0305-1048. PMID 18039715.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2238915
  9. Stoesser, G.; Baker, W; Van Den Broek, A; Garcia-Pastor, M; Kanz, C; Kulikova, T; Leinonen, R; Lin, Q et al. (2003). "The EMBL Nucleotide Sequence Database: major new developments". Nucleic Acids Research 31 (1): 17–22. doi:10.1093/nar/gkg021. ISSN 1362-4962. PMID 12519939.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=165468
  10. "The European Nucleotide Archive". Nucleic Acids Res. 39 (Database issue): D28–31. January 2011. doi:10.1093/nar/gkq967. PMID 20972220.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3013801
  11. Leinonen, R.; Akhtar, R.; Birney, E.; Bonfield, J.; Bower, L.; Corbett, M.; Cheng, Y.; Demiralp, F. et al. (2009). "Improvements to services at the European Nucleotide Archive". Nucleic Acids Research 38 (Database): D39–D45. doi:10.1093/nar/gkp998. ISSN 0305-1048. PMID 19906712.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2808951
  12. EMBL-EBI. "EMBL Nucleotide Sequence Database". http://www.ebi.ac.uk/embl/. Retrieved 2013-01-08. 
  13. EMBL-EBI. "About the European Nucleotide Archive". http://www.ebi.ac.uk/ena/about/about. Retrieved 2013-01-07. 
  14. "EMBL Nucleotide Sequence Database: Release Notes". EMBL-Bank Release Notes 114. EMBL-EBI. Dec 2012. http://www.ebi.ac.uk/embl/Documentation/Release_notes/current/relnotes.html. Retrieved 2013-01-07. 
  15. Amid, C.; Birney, E.; Bower, L.; Cerdeno-Tarraga, A.; Cheng, Y.; Cleland, I.; Faruque, N.; Gibson, R. et al. (2011). "Major submissions tool developments at the European nucleotide archive". Nucleic Acids Research 40 (D1): D43–D47. doi:10.1093/nar/gkr946. ISSN 0305-1048. PMID 22080548.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3245037
  16. Stoesser, G.; Baker, W; Van Den Broek, A; Camon, E; Garcia-Pastor, M; Kanz, C; Kulikova, T; Leinonen, R et al. (2002). "The EMBL Nucleotide Sequence Database". Nucleic Acids Research 30 (1): 21–26. doi:10.1093/nar/30.1.21. ISSN 1362-4962. PMID 11752244.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=99098
  17. "EMBL-Bank data classes". EBML-EBI. 2012. http://www.ebi.ac.uk/ena/about/embl_bank_format. Retrieved 2013-01-08. 
  18. "EMBL-Bank User Manual (Release 129)" (Plaintext). EMBL-EBI. Sep 2016. ftp://ftp.ebi.ac.uk/pub/databases/embl/doc/usrman.txt. Retrieved 2016-11-03. 
  19. "NCBI SRA Overview". NCBI. 1 Jan 2013. Archived from the original on February 8, 2013. https://web.archive.org/web/20130208055746/http://0-www.ncbi.nlm.nih.gov.elis.tmu.edu.tw/Traces/sra/. Retrieved 2013-01-08. 
  20. Kodama, Y.; Shumway, M.; Leinonen, R. (2011). "The sequence read archive: explosive growth of sequencing data". Nucleic Acids Research 40 (D1): D54–D56. doi:10.1093/nar/gkr854. ISSN 0305-1048. PMID 22009675.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3245110
  21. "The sequence read archive". Nucleic Acids Res. 39 (Database issue): D19–21. January 2011. doi:10.1093/nar/gkq1019. PMID 21062823.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3013647
  22. Ostell, Jim (2009). "NCBI's Sequence Read Archive: A Core Enabling Infrastructure". Bio IT World. http://www.bio-itworld.com/BioIT_Article.aspx?id=94069. Retrieved 2013-01-08. 
  23. "About the NCBI Sequence Read Archive". NCBI. 8 Jan 2013. http://0-www.ncbi.nlm.nih.gov.elis.tmu.edu.tw/Traces/sra/sra.cgi?view=about. Retrieved 2013-01-10. 
  24. Shumway, M.; Cochrane, G.; Sugawara, H. (2009). "Archiving next generation sequencing data". Nucleic Acids Research 38 (Database): D870–D871. doi:10.1093/nar/gkp1078. ISSN 0305-1048.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2808927
  25. Mcwilliam, H.; Valentin, F.; Goujon, M.; Li, W.; Narayanasamy, M.; Martin, J.; Miyar, T.; Lopez, R. (2009). "Web services at the European Bioinformatics Institute-2009". Nucleic Acids Research 37 (Web Server): W6–W10. doi:10.1093/nar/gkp302. ISSN 0305-1048. PMID 19435877.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2703973
  26. Cochrane, G.; Alako, B.; Amid, C.; Bower, L.; Cerdeno-Tarraga, A.; Cleland, I.; Gibson, R.; Goodgame, N. et al. (2012). "Facing growth in the European Nucleotide Archive". Nucleic Acids Research 41 (D1): D30–D35. doi:10.1093/nar/gks1175. ISSN 0305-1048. PMID 23203883.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3531187
  27. Cochrane, G.; Akhtar, R.; Bonfield, J.; Bower, L.; Demiralp, F.; Faruque, N.; Gibson, R.; Hoad, G. et al. (2009). "Petabyte-scale innovations at the European Nucleotide Archive". Nucleic Acids Research 37 (Database): D19–D25. doi:10.1093/nar/gkn765. ISSN 0305-1048. PMID 18978013.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2686451
  28. "EMBL-EBI will continue to support the Sequence Read Archive for raw data". Press Release (EMBL-EBI). 16 Feb 2011. http://www.ebi.ac.uk/ena/sites/ebi.ac.uk.ena/files/documents/sra_announcement_feb_2011.pdf. Retrieved 2013-01-07. 
  29. Hsi-Yang Fritz, M.; Leinonen, R.; Cochrane, G.; Birney, E. (2011). "Efficient storage of high throughput DNA sequencing data using reference-based compression". Genome Research 21 (5): 734–740. doi:10.1101/gr.114819.110. ISSN 1088-9051. PMID 21245279.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3083090
  30. "About ELIXIR". ELIXIR. http://www.elixir-europe.org/about. Retrieved 2013-01-09. 
  31. Crosswell, Lindsey C.; Thornton, Janet M. (2012). "ELIXIR: a distributed infrastructure for European biological data". Trends in Biotechnology 30 (5): 241–242. doi:10.1016/j.tibtech.2012.02.002. ISSN 0167-7799. PMID 22417641.  https://dx.doi.org/10.1016%2Fj.tibtech.2012.02.002
More
©Text is available under the terms and conditions of the Creative Commons-Attribution ShareAlike (CC BY-SA) license; additional terms may apply. By using this site, you agree to the Terms and Conditions and Privacy Policy.
Upload a video for this entry
Information
Subjects: Genetics & Heredity
Contributor MDPI registered users' name will be linked to their SciProfiles pages. To register with us, please refer to https://encyclopedia.pub/register :
HandWiki
View Times: 2.5K
Entry Collection: HandWiki
Revision: 1 time (View History)
Update Date: 28 Nov 2022
Table of Contents
    Notice
    You are not a member of the advisory board for this topic. If you want to update advisory board member profile, please contact office@encyclopedia.pub.
    OK
    Confirm
    Only members of the Encyclopedia advisory board for this topic are allowed to note entries. Would you like to become an advisory board member of the Encyclopedia?
    Yes
    No
    ${ textCharacter }/${ maxCharacter }
    Submit
    Cancel
    There is no comment~
    ${ textCharacter }/${ maxCharacter }
    Submit
    Cancel
    ${ selectedItem.replyTextCharacter }/${ selectedItem.replyMaxCharacter }
    Submit
    Cancel
    Confirm
    Are you sure to Delete?
    Yes No
    Academic Video Service
    Feedback