Your browser does not fully support modern features. Please upgrade for a smoother experience.
Submitted Successfully!
Thank you for your contribution! You can also upload a video entry or images related to this topic. For video creation, please contact our Academic Video Service.
Version Summary Created by Modification Content Size Created at Operation
1 handwiki Camila Xu -- 1632 2022-11-18 01:42:57

Video Upload Options

We provide professional Academic Video Service to translate complex research into visually appealing presentations. Would you like to try it?
Cite
If you have any further questions, please contact Encyclopedia Editorial Office.
HandWiki. Zetaproteobacteria. Encyclopedia. Available online: https://encyclopedia.pub/entry/35162 (accessed on 13 September 2026).
HandWiki. Zetaproteobacteria. Encyclopedia. Available at: https://encyclopedia.pub/entry/35162. Accessed September 13, 2026.
HandWiki. "Zetaproteobacteria" Encyclopedia, https://encyclopedia.pub/entry/35162 (accessed September 13, 2026).
HandWiki. (2022, November 18). Zetaproteobacteria. In Encyclopedia. https://encyclopedia.pub/entry/35162
HandWiki. "Zetaproteobacteria." Encyclopedia. Web. 18 November, 2022.
Zetaproteobacteria
Edit

The class Zetaproteobacteria is the sixth and most recently described class of the Proteobacteria. Zetaproteobacteria can also refer to the group of organisms assigned to this class. The Zetaproteobacteria were originally represented by a single described species, Mariprofundus ferrooxydans, which is an iron-oxidizing neutrophilic chemolithoautotroph originally isolated from Loihi Seamount in 1996 (post-eruption). Molecular cloning techniques focusing on the small subunit ribosomal RNA gene have also been used to identify a more diverse majority of the Zetaproteobacteria that have as yet been unculturable. Regardless of culturing status, the Zetaproteobacteria show up worldwide in estuarine and marine habitats associated with opposing steep redox gradients of reduced (ferrous) iron and oxygen, either as a minor detectable component or as the dominant member of the microbial community. Zetaproteobacteria have been most commonly found at deep-sea hydrothermal vents, though recent discovery of members of this class in near-shore environments has led to the reevaluation of Zetaproteobacteria distribution and significance.

microbial zetaproteobacteria hydrothermal

References

  1. McBeth, J. M.; Little, B. J.; Ray, R. I.; Farrar, K. M.; Emerson, D. (2010). "Neutrophilic Iron-Oxidizing "Zetaproteobacteria" and Mild Steel Corrosion in Nearshore Marine Environments". Applied and Environmental Microbiology 77 (4): 1405–1412. doi:10.1128/AEM.02095-10. PMID 21131509.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3067224
  2. Dang, H.; Chen, R.; Wang, L.; Shao, S.; Dai, L.; Ye, Y.; Guo, L.; Huang, G. et al. (2011). "Molecular characterization of putative biocorroding microbiota with a novel niche detection of Epsilon- and Zetaproteobacteria in Pacific Ocean coastal seawaters". Environmental Microbiology 13 (11): 3059–3074. doi:10.1111/j.1462-2920.2011.02583.x. PMID 21951343.  https://dx.doi.org/10.1111%2Fj.1462-2920.2011.02583.x
  3. Lee, J. S.; McBeth, J. M.; Ray, R. I.; Little, B. J.; Emerson, D. (2013). "Iron cycling at corroding carbon steel surfaces". Biofouling 29 (10): 1243–1252. doi:10.1080/08927014.2013.836184. PMID 24093730.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3827670
  4. Moyer, C. L.; Dobbs, F. C.; Karl, D. M. (1995). "Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii". Applied and Environmental Microbiology 61 (4): 1555–1562. doi:10.1128/AEM.61.4.1555-1562.1995. PMID 7538279.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=167411
  5. Emerson, D.; Moyer, C. L. (2002). "Neutrophilic Fe-oxidizing bacteria are abundant at the Loihi Seamount hydrothermal vents and play a major role in Fe oxide deposition". Applied and Environmental Microbiology 68 (6): 3085–3093. doi:10.1128/AEM.68.6.3085-3093.2002. PMID 12039770.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=123976
  6. Emerson, D.; Merrill Floyd, M. (2005). "Enrichment and Isolation of Iron‐Oxidizing Bacteria at Neutral pH". Environmental Microbiology. Methods in Enzymology. 397. pp. 112–23. doi:10.1016/S0076-6879(05)97006-7. ISBN 9780121828028.  https://dx.doi.org/10.1016%2FS0076-6879%2805%2997006-7
  7. Summers, Z. M.; Gralnick, J. A.; Bond, D. R. (2013). "Cultivation of an Obligate Fe(II)-Oxidizing Lithoautotrophic Bacterium Using Electrodes". mBio 4 (1): e00420–e00412. doi:10.1128/mBio.00420-12. PMID 23362318.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3560526
  8. Barco, R. A.; Edwards, K. J. (2014). "Interactions of proteins with biogenic iron oxyhydroxides and a new culturing technique to increase biomass yields of neutrophilic, iron-oxidizing bacteria". Frontiers in Microbiology 5: 259. doi:10.3389/fmicb.2014.00259. PMID 24910632.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4038746
  9. Emerson, D.; Fleming, E. J.; McBeth, J. M. (2010). "Iron-Oxidizing Bacteria: An Environmental and Genomic Perspective". Annual Review of Microbiology 64: 561–583. doi:10.1146/annurev.micro.112408.134208. PMID 20565252.  https://dx.doi.org/10.1146%2Fannurev.micro.112408.134208
  10. Chan, C. S.; Fakra, S. C.; Emerson, D.; Fleming, E. J.; Edwards, K. J. (2010). "Lithotrophic iron-oxidizing bacteria produce organic stalks to control mineral growth: Implications for biosignature formation". The ISME Journal 5 (4): 717–727. doi:10.1038/ismej.2010.173. PMID 21107443.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3105749
  11. Comolli, L. R.; Luef, B.; Chan, C. S. (2011). "High-resolution 2D and 3D cryo-TEM reveals structural adaptations of two stalk-forming bacteria to an Fe-oxidizing lifestyle". Environmental Microbiology 13 (11): 2915–2929. doi:10.1111/j.1462-2920.2011.02567.x. PMID 21895918.  https://dx.doi.org/10.1111%2Fj.1462-2920.2011.02567.x
  12. Saini, G.; Chan, C. S. (2013). "Near-neutral surface charge and hydrophilicity prevent mineral encrustation of Fe-oxidizing micro-organisms". Geobiology 11 (2): 191–200. doi:10.1111/gbi.12021. PMID 23279435.  https://dx.doi.org/10.1111%2Fgbi.12021
  13. Fleming, E. J.; Davis, R. E.; McAllister, S. M.; Chan, C. S.; Moyer, C. L.; Tebo, B. M.; Emerson, D. (2013). "Hidden in plain sight: Discovery of sheath-forming, iron-oxidizing Zetaproteobacteriaat Loihi Seamount, Hawaii, USA". FEMS Microbiology Ecology 85 (1): 116–127. doi:10.1111/1574-6941.12104. PMID 23480633.  https://dx.doi.org/10.1111%2F1574-6941.12104
  14. Juniper, S. Kim; Yves Fouquet (1988). "Filamentous iron-silica deposits from modern and ancient hydrothermal sites". Canadian Mineralogist 26: 859–869. 
  15. Hofmann, B. A.; Farmer, J. D.; von Blanckenburg, F.; Fallick, A. E. (2008). "Subsurface Filamentous Fabrics: An Evaluation of Origins Based on Morphological and Geochemical Criteria, with Implications for Exopaleontology". Astrobiology 8 (1): 87–117. doi:10.1089/ast.2007.0130. PMID 18241094. Bibcode: 2008AsBio...8...87H.  https://dx.doi.org/10.1089%2Fast.2007.0130
  16. Planavsky, N.; Rouxel, O.; Bekker, A.; Shapiro, R.; Fralick, P.; Knudsen, A. (2009). "Iron-oxidizing microbial ecosystems thrived in late Paleoproterozoic redox-stratified oceans". Earth and Planetary Science Letters 286 (1–2): 230–242. doi:10.1016/j.epsl.2009.06.033. Bibcode: 2009E&PSL.286..230P.  https://dx.doi.org/10.1016%2Fj.epsl.2009.06.033
  17. Little, C. T. S.; Glynn, S. E. J.; Mills, R. A. (2004). "Four-Hundred-and-Ninety-Million-Year Record of Bacteriogenic Iron Oxide Precipitation at Sea-Floor Hydrothermal Vents". Geomicrobiology Journal 21 (6): 415–429. doi:10.1080/01490450490485845. http://eprints.whiterose.ac.uk/338/1/littlects2.pdf. 
  18. Sun, Z.; Li, J.; Huang, W.; Dong, H.; Little, C. T. S.; Li, J. (2015). "Generation of hydrothermal Fe-Si oxyhydroxide deposit on the Southwest Indian Ridge and its implication for the origin of ancient banded iron formations". Journal of Geophysical Research: Biogeosciences 120 (1): 187–203. doi:10.1002/2014JG002764. Bibcode: 2015JGRG..120..187S. http://eprints.whiterose.ac.uk/83794/7/Sun_et_al-2015-Journal_of_Geophysical_Research__Biogeosciences.pdf. 
  19. Krepski, S. T.; Emerson, D.; Hredzak-Showalter, P. L.; Luther, G. W.; Chan, C. S. (2013). "Morphology of biogenic iron oxides records microbial physiology and environmental conditions: Toward interpreting iron microfossils". Geobiology 11 (5): 457–71. doi:10.1111/gbi.12043. PMID 23790206.  https://dx.doi.org/10.1111%2Fgbi.12043
  20. Chan, C. S.; Fakra, S. C.; Edwards, D. C.; Emerson, D.; Banfield, J. F. (2009). "Iron oxyhydroxide mineralization on microbial extracellular polysaccharides". Geochimica et Cosmochimica Acta 73 (13): 3807–3818. doi:10.1016/j.gca.2009.02.036. Bibcode: 2009GeCoA..73.3807C. https://digital.library.unt.edu/ark:/67531/metadc1014633/. 
  21. Bennett, S. A.; Toner, B. M.; Barco, R.; Edwards, K. J. (2014). "Carbon adsorption onto Fe oxyhydroxide stalks produced by a lithotrophic iron-oxidizing bacteria". Geobiology 12 (2): 146–156. doi:10.1111/gbi.12074. PMID 24428517.  https://dx.doi.org/10.1111%2Fgbi.12074
  22. McAllister, S. M.; Davis, R. E.; McBeth, J. M.; Tebo, B. M.; Emerson, D.; Moyer, C. L. (2011). "Biodiversity and Emerging Biogeography of the Neutrophilic Iron-Oxidizing Zetaproteobacteria". Applied and Environmental Microbiology 77 (15): 5445–5457. doi:10.1128/AEM.00533-11. PMID 21666021.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3147450
  23. Kato, S.; Yanagawa, K.; Sunamura, M.; Takano, Y.; Ishibashi, J. I.; Kakegawa, T.; Utsumi, M.; Yamanaka, T. et al. (2009). "Abundance of Zetaproteobacteria within crustal fluids in back-arc hydrothermal fields of the Southern Mariana Trough". Environmental Microbiology 11 (12): 3210–3222. doi:10.1111/j.1462-2920.2009.02031.x. PMID 19691504.  https://dx.doi.org/10.1111%2Fj.1462-2920.2009.02031.x
  24. Emerson, D.; Rentz, J. A.; Lilburn, T. G.; Davis, R. E.; Aldrich, H.; Chan, C.; Moyer, C. L. (2007). Reysenbach, Anna-Louise. ed. "A Novel Lineage of Proteobacteria Involved in Formation of Marine Fe-Oxidizing Microbial Mat Communities". PLOS ONE 2 (8): e667. doi:10.1371/journal.pone.0000667. PMID 17668050. Bibcode: 2007PLoSO...2..667E.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1930151
  25. Rassa, A. C.; McAllister, S. M.; Safran, S. A.; Moyer, C. L. (2009). "Zeta-ProteobacteriaDominate the Colonization and Formation of Microbial Mats in Low-Temperature Hydrothermal Vents at Loihi Seamount, Hawaii". Geomicrobiology Journal 26 (8): 623–638. doi:10.1080/01490450903263350.  https://dx.doi.org/10.1080%2F01490450903263350
  26. Emerson, D.; Moyer, C. (2010). "Microbiology of Seamounts: Common Patterns Observed in Community Structure". Oceanography 23: 148–163. doi:10.5670/oceanog.2010.67.  https://dx.doi.org/10.5670%2Foceanog.2010.67
  27. Sudek, L. A.; Templeton, A. S.; Tebo, B. M.; Staudigel, H. (2009). "Microbial Ecology of Fe (hydr)oxide Mats and Basaltic Rock from Vailulu'u Seamount, American Samoa". Geomicrobiology Journal 26 (8): 581–596. doi:10.1080/01490450903263400.  https://dx.doi.org/10.1080%2F01490450903263400
  28. Edwards, K. J.; Glazer, B. T.; Rouxel, O. J.; Bach, W.; Emerson, D.; Davis, R. E.; Toner, B. M.; Chan, C. S. et al. (2011). "Ultra-diffuse hydrothermal venting supports Fe-oxidizing bacteria and massive umber deposition at 5000 m off Hawaii". The ISME Journal 5 (11): 1748–1758. doi:10.1038/ismej.2011.48. PMID 21544100.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3197161
  29. Kato, S.; Kobayashi, C.; Kakegawa, T.; Yamagishi, A. (2009). "Microbial communities in iron-silica-rich microbial mats at deep-sea hydrothermal fields of the Southern Mariana Trough". Environmental Microbiology 11 (8): 2094–2111. doi:10.1111/j.1462-2920.2009.01930.x. PMID 19397679.  https://dx.doi.org/10.1111%2Fj.1462-2920.2009.01930.x
  30. Davis, R. E.; Moyer, C. L. (2008). "Extreme spatial and temporal variability of hydrothermal microbial mat communities along the Mariana Island Arc and southern Mariana back-arc system". Journal of Geophysical Research 113 (B8): B08S15. doi:10.1029/2007JB005413. Bibcode: 2008JGRB..113.8S15D. https://cedar.wwu.edu/cgi/viewcontent.cgi?article=1019&context=biology_facpubs. 
  31. Kato, S.; Nakamura, K.; Toki, T.; Ishibashi, J. I.; Tsunogai, U.; Hirota, A.; Ohkuma, M.; Yamagishi, A. (2012). "Iron-Based Microbial Ecosystem on and Below the Seafloor: A Case Study of Hydrothermal Fields of the Southern Mariana Trough". Frontiers in Microbiology 3: 89. doi:10.3389/fmicb.2012.00089. PMID 22435065.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3304087
  32. Hodges, T. W.; Olson, J. B. (2008). "Molecular Comparison of Bacterial Communities within Iron-Containing Flocculent Mats Associated with Submarine Volcanoes along the Kermadec Arc". Applied and Environmental Microbiology 75 (6): 1650–1657. doi:10.1128/AEM.01835-08. PMID 19114513.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2655482
  33. Forget, N. L.; Murdock, S. A.; Juniper, S. K. (2010). "Bacterial diversity in Fe-rich hydrothermal sediments at two South Tonga Arc submarine volcanoes". Geobiology 8 (5): 417–432. doi:10.1111/j.1472-4669.2010.00247.x. PMID 20533949.  https://dx.doi.org/10.1111%2Fj.1472-4669.2010.00247.x
  34. Meyer-Dombard, D. A. R.; Amend, J. P.; Osburn, M. R. (2012). "Microbial diversity and potential for arsenic and iron biogeochemical cycling at an arsenic rich, shallow-sea hydrothermal vent (Tutum Bay, Papua New Guinea)". Chemical Geology 348: 37–47. doi:10.1016/j.chemgeo.2012.02.024.  https://dx.doi.org/10.1016%2Fj.chemgeo.2012.02.024
  35. Schauer, R.; Røy, H.; Augustin, N.; Gennerich, H. H.; Peters, M.; Wenzhoefer, F.; Amann, R.; Meyerdierks, A. (2011). "Bacterial sulfur cycling shapes microbial communities in surface sediments of an ultramafic hydrothermal vent field". Environmental Microbiology 13 (10): 2633–2648. doi:10.1111/j.1462-2920.2011.02530.x. PMID 21895907. https://epic.awi.de/id/eprint/30076/1/SchauerEtAl_SupportingInformation.pdf. 
  36. Davis, R. E.; Stakes, D. S.; Wheat, C. G.; Moyer, C. L. (2009). "Bacterial Variability within an Iron-Silica-Manganese-rich Hydrothermal Mound Located Off-axis at the Cleft Segment, Juan de Fuca Ridge". Geomicrobiology Journal 26 (8): 570–580. doi:10.1080/01490450902889080.  https://dx.doi.org/10.1080%2F01490450902889080
  37. Li, J.; Zhou, H.; Peng, X.; Wu, Z.; Chen, S.; Fang, J. (2012). "Microbial diversity and biomineralization in low-temperature hydrothermal iron-silica-rich precipitates of the Lau Basin hydrothermal field". FEMS Microbiology Ecology 81 (1): 205–216. doi:10.1111/j.1574-6941.2012.01367.x. PMID 22443540.  https://dx.doi.org/10.1111%2Fj.1574-6941.2012.01367.x
  38. Dekov, V. M.; Petersen, S.; Garbe-Schönberg, C. -D.; Kamenov, G. D.; Perner, M.; Kuzmann, E.; Schmidt, M. (2010). "Fe–Si-oxyhydroxide deposits at a slow-spreading centre with thickened oceanic crust: The Lilliput hydrothermal field (9°33′S, Mid-Atlantic Ridge)". Chemical Geology 278 (3–4): 186–200. doi:10.1016/j.chemgeo.2010.09.012.  https://dx.doi.org/10.1016%2Fj.chemgeo.2010.09.012
  39. MacDonald, D. J.; Findlay, A. J.; McAllister, S. M.; Barnett, J. M.; Hredzak-Showalter, P.; Krepski, S. T.; Cone, S. G.; Scott, J. et al. (2014). "Using in situ voltammetry as a tool to identify and characterize habitats of iron-oxidizing bacteria: From fresh water wetlands to hydrothermal vent sites". Environmental Science: Processes & Impacts 16 (9): 2117–2126. doi:10.1039/c4em00073k. PMID 24924809.  https://dx.doi.org/10.1039%2Fc4em00073k
  40. Scott, J. J.; Breier, J. A.; Luther, G. W.; Emerson, D. (2015). "Microbial Iron Mats at the Mid-Atlantic Ridge and Evidence that Zetaproteobacteria May Be Restricted to Iron-Oxidizing Marine Systems". PLOS ONE 10 (3): e0119284. doi:10.1371/journal.pone.0119284. PMID 25760332. Bibcode: 2015PLoSO..1019284S.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4356598
  41. Cao, H.; Wang, Y.; Lee, O. O.; Zeng, X.; Shao, Z.; Qian, P. -Y. (2014). "Microbial Sulfur Cycle in Two Hydrothermal Chimneys on the Southwest Indian Ridge". mBio 5 (1): e00980–e00913. doi:10.1128/mBio.00980-13. PMID 24473131.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3903282
  42. Sylvan, J. B.; Toner, B. M.; Edwards, K. J. (2012). "Life and Death of Deep-Sea Vents: Bacterial Diversity and Ecosystem Succession on Inactive Hydrothermal Sulfides". mBio 3 (1): e00279–e00211. doi:10.1128/mBio.00279-11. PMID 22275502.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3262234
  43. Handley, K. M.; Boothman, C.; Mills, R. A.; Pancost, R. D.; Lloyd, J. R. (2010). "Functional diversity of bacteria in a ferruginous hydrothermal sediment". The ISME Journal 4 (9): 1193–1205. doi:10.1038/ismej.2010.38. PMID 20410934.  https://dx.doi.org/10.1038%2Fismej.2010.38
  44. Dhillon, A.; Teske, A.; Dillon, J.; Stahl, D. A.; Sogin, M. L. (2003). "Molecular characterization of sulfate-reducing bacteria in the Guaymas Basin". Applied and Environmental Microbiology 69 (5): 2765–2772. doi:10.1128/AEM.69.5.2765-2772.2003. PMID 12732547.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=154542
  45. Kato, S.; Ikehata, K.; Shibuya, T.; Urabe, T.; Ohkuma, M.; Yamagishi, A. (2015). "Potential for biogeochemical cycling of sulfur, iron and carbon within massive sulfide deposits below the seafloor". Environmental Microbiology 17 (5): 1817–35. doi:10.1111/1462-2920.12648. PMID 25330135.  https://dx.doi.org/10.1111%2F1462-2920.12648
  46. Jacobson Meyers, M. E.; Sylvan, J. B.; Edwards, K. J. (2014). "Extracellular Enzyme Activity and Microbial Diversity Measured on Seafloor Exposed Basalts from Loihi Seamount Indicate the Importance of Basalts to Global Biogeochemical Cycling". Applied and Environmental Microbiology 80 (16): 4854–64. doi:10.1128/AEM.01038-14. PMID 24907315.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4135773
  47. Rubin-Blum, M.; Antler, G.; Tsadok, R.; Shemesh, E.; Austin, J. A.; Coleman, D. F.; Goodman-Tchernov, B. N.; Ben-Avraham, Z. et al. (2014). "First Evidence for the Presence of Iron Oxidizing Zetaproteobacteria at the Levantine Continental Margins". PLOS ONE 9 (3): e91456. doi:10.1371/journal.pone.0091456. PMID 24614177. Bibcode: 2014PLoSO...991456R.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3948872
  48. Bowman, J. P.; McCuaig, R. D. (2003). "Biodiversity, community structural shifts, and biogeography of prokaryotes within Antarctic continental shelf sediment". Applied and Environmental Microbiology 69 (5): 2463–2483. doi:10.1128/AEM.69.5.2463-2483.2003. PMID 12732511.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=154503
  49. Eder, W.; Jahnke, L. L.; Schmidt, M.; Huber, R. (2001). "Microbial Diversity of the Brine-Seawater Interface of the Kebrit Deep, Red Sea, Studied via 16S rRNA Gene Sequences and Cultivation Methods". Applied and Environmental Microbiology 67 (7): 3077–3085. doi:10.1128/AEM.67.7.3077-3085.2001. PMID 11425725.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=92984
  50. McAllister, S. M.; Barnett, J. M.; Heiss, J. W.; Findlay, A. J.; MacDonald, D. J.; Dow, C. L.; Luther, G. W.; Michael, H. A. et al. (2015). "Dynamic hydrologic and biogeochemical processes drive microbially enhanced iron and sulfur cycling within the intertidal mixing zone of a beach aquifer". Limnology and Oceanography 60 (1): 329–345. doi:10.1002/lno.10029. Bibcode: 2015LimOc..60..329M.  https://dx.doi.org/10.1002%2Flno.10029
  51. Moreau, J. W.; Zierenberg, R. A.; Banfield, J. F. (2010). "Diversity of Dissimilatory Sulfite Reductase Genes (dsrAB) in a Salt Marsh Impacted by Long-Term Acid Mine Drainage". Applied and Environmental Microbiology 76 (14): 4819–4828. doi:10.1128/AEM.03006-09. PMID 20472728.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2901737
  52. Stauffert, M.; Cravo-Laureau, C.; Jézéquel, R.; Barantal, S.; Cuny, P.; Gilbert, F.; Cagnon, C.; Militon, C. C. et al. (2013). "Impact of Oil on Bacterial Community Structure in Bioturbated Sediments". PLOS ONE 8 (6): e65347. doi:10.1371/journal.pone.0065347. PMID 23762350. Bibcode: 2013PLoSO...865347S.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3677869
  53. Pischedda, L.; Militon, C. C.; Gilbert, F.; Cuny, P. (2011). "Characterization of specificity of bacterial community structure within the burrow environment of the marine polychaete Hediste (Nereis) diversicolor". Research in Microbiology 162 (10): 1033–42. doi:10.1016/j.resmic.2011.07.008. PMID 21946148. https://hal.archives-ouvertes.fr/hal-00704691/document. 
  54. Asano, R.; Nakai, Y.; Kawada, W.; Shimura, Y.; Inamoto, T.; Fukushima, J. (2013). "Seawater Inundation from the 2011 Tohoku Tsunami Continues to Strongly Affect Soil Bacterial Communities 1 Year Later". Microbial Ecology 66 (3): 639–46. doi:10.1007/s00248-013-0261-9. PMID 23846833.  https://dx.doi.org/10.1007%2Fs00248-013-0261-9
  55. Thompson, C.; Beys-Da-Silva, W.; Santi, L. L.; Berger, M.; Vainstein, M.; Guima Rães, J.; Vasconcelos, A. T. (2013). "A potential source for cellulolytic enzyme discovery and environmental aspects revealed through metagenomics of Brazilian mangroves". AMB Express 3 (1): 65. doi:10.1186/2191-0855-3-65. PMID 24160319.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3922913
  56. Emerson, J. B.; Thomas, B. C.; Alvarez, W.; Banfield, J. F. (2015). "Metagenomic analysis of a high carbon dioxide subsurface microbial community populated by chemolithoautotrophs and bacteria and archaea from candidate phyla". Environmental Microbiology 18 (6): 1686–1703. doi:10.1111/1462-2920.12817. PMID 25727367.  https://dx.doi.org/10.1111%2F1462-2920.12817
  57. Colman, D. R.; Garcia, J. R.; Crossey, L. J.; Karlstrom, K.; Jackson-Weaver, O.; Takacs-Vesbach, C. (2014). "An analysis of geothermal and carbonic springs in the western United States sustained by deep fluid inputs". Geobiology 12 (1): 83–98. doi:10.1111/gbi.12070. PMID 24286205.  https://dx.doi.org/10.1111%2Fgbi.12070
  58. Ionescu, D.; Heim, C.; Polerecky, L.; Ramette, A.; Haeusler, S.; Bizic-Ionescu, M.; Thiel, V.; De Beer, D. (2015). "Diversity of Iron Oxidizing and Reducing Bacteria in Flow Reactors in the Äspö Hard Rock Laboratory". Geomicrobiology Journal 32 (3–4): 207–220. doi:10.1080/01490451.2014.884196. https://figshare.com/articles/journal_contribution/Diversity_of_Iron_Oxidizing_and_Reducing_Bacteria_in_Flow_Reactors_in_the_196_sp_246_Hard_Rock_Laboratory/1378771. 
  59. Zbinden, M.; Cambon-Bonavita, M. A. (2003). "Occurrence of Deferribacterales and Entomoplasmatales in the deep-sea Alvinocarid shrimp Rimicaris exoculata gut". FEMS Microbiology Ecology 46 (1): 23–30. doi:10.1016/S0168-6496(03)00176-4. PMID 19719579.  https://dx.doi.org/10.1016%2FS0168-6496%2803%2900176-4
  60. Jan, C.; Petersen, J. M.; Werner, J.; Teeling, H.; Huang, S.; Glöckner, F. O.; Golyshina, O. V.; Dubilier, N. et al. (2014). "The gill chamber epibiosis of deep-sea shrimp Rimicarisexoculata: An in-depth metagenomic investigation and discovery of Zetaproteobacteria". Environmental Microbiology 16 (9): 2723–38. doi:10.1111/1462-2920.12406. PMID 24447589. https://zenodo.org/record/14795. 
  61. Glazer, B. T.; Rouxel, O. J. (2009). "Redox Speciation and Distribution within Diverse Iron-dominated Microbial Habitats at Loihi Seamount". Geomicrobiology Journal 26 (8): 606–622. doi:10.1080/01490450903263392.  https://dx.doi.org/10.1080%2F01490450903263392
  62. Singer, E.; Emerson, D.; Webb, E. A.; Barco, R. A.; Kuenen, J. G.; Nelson, W. C.; Chan, C. S.; Comolli, L. R. et al. (2011). Khodursky, Arkady B. ed. "Mariprofundus ferrooxydans PV-1 the First Genome of a Marine Fe(II) Oxidizing Zetaproteobacterium". PLOS ONE 6 (9): e25386. doi:10.1371/journal.pone.0025386. PMID 21966516. Bibcode: 2011PLoSO...625386S.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3179512
  63. Singer, E.; Heidelberg, J. F.; Dhillon, A.; Edwards, K. J. (2013). "Metagenomic insights into the dominant Fe(II) oxidizing Zetaproteobacteria from an iron mat at Lō´ihi, Hawai´l". Frontiers in Microbiology 4: 52. doi:10.3389/fmicb.2013.00052. PMID 23518919.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3603346
  64. Field, E. K.; Sczyrba, A.; Lyman, A. E.; Harris, C. C.; Woyke, T.; Stepanauskas, R.; Emerson, D. (2014). "Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount". The ISME Journal 9 (4): 857–70. doi:10.1038/ismej.2014.183. PMID 25303714.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4817698
  65. Ilbert, M.; Bonnefoy, V. (2013). "Insight into the evolution of the iron oxidation pathways". Biochimica et Biophysica Acta (BBA) - Bioenergetics 1827 (2): 161–175. doi:10.1016/j.bbabio.2012.10.001. PMID 23044392.  https://dx.doi.org/10.1016%2Fj.bbabio.2012.10.001
  66. Emerson, D.; Field, E. K.; Chertkov, O.; Davenport, K. W.; Goodwin, L.; Munk, C.; Nolan, M.; Woyke, T. (2013). "Comparative genomics of freshwater Fe-oxidizing bacteria: Implications for physiology, ecology, and systematics". Frontiers in Microbiology 4: 254. doi:10.3389/fmicb.2013.00254. PMID 24062729.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3770913
  67. Altermann, E. (2014). "Invited commentary: Lubricating the rusty wheel, new insights into iron oxidizing bacteria through comparative genomics". Frontiers in Microbiology 5: 386. doi:10.3389/fmicb.2014.00386. PMID 25126088.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4115626
  68. Jesser, K. J.; Fullerton, H.; Hager, K. W.; Moyer, C. L. (2015). "Quantitative PCR Analysis of Functional Genes in Iron-Rich Microbial Mats at an Active Hydrothermal Vent System (Lō'ihi Seamount, Hawai'i)". Applied and Environmental Microbiology 81 (9): 2976–2984. doi:10.1128/AEM.03608-14. PMID 25681182.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4393452
  69. Hedrich, S.; Schlomann, M.; Johnson, D. B. (2011). "The iron-oxidizing proteobacteria". Microbiology 157 (6): 1551–1564. doi:10.1099/mic.0.045344-0. PMID 21511765.  https://dx.doi.org/10.1099%2Fmic.0.045344-0
  70. Kato, Shingo (2015). "Ecophysiology of neutrophilic iron-oxidizing microorganisms and its significance in global biogeochemical cycling". Chikyukagaku (Geochemistry) 49: 1–17. doi:10.14934/chikyukagaku.49.1.  https://dx.doi.org/10.14934%2Fchikyukagaku.49.1
  71. Ishibashi, Jun-Ichiro; Okino, Kyoko; Sunamura, Michinari, eds (2015). Subseafloor Biosphere Linked to Hydrothermal Systems. doi:10.1007/978-4-431-54865-2. ISBN 978-4-431-54864-5.  https://dx.doi.org/10.1007%2F978-4-431-54865-2
  72. Melton, E. D.; Swanner, E. D.; Behrens, S.; Schmidt, C.; Kappler, A. (2014). "The interplay of microbially mediated and abiotic reactions in the biogeochemical Fe cycle". Nature Reviews Microbiology 12 (12): 797–808. doi:10.1038/nrmicro3347. PMID 25329406.  https://dx.doi.org/10.1038%2Fnrmicro3347
More
Upload a video for this entry
Information
Subjects: Microbiology
Contributor MDPI registered users' name will be linked to their SciProfiles pages. To register with us, please refer to https://encyclopedia.pub/register :
View Times: 1.5K
Entry Collection: HandWiki
Revision: 1 time (View History)
Update Date: 18 Nov 2022
Notice
You are not a member of the advisory board for this topic. If you want to update advisory board member profile, please contact office@encyclopedia.pub.
OK
Confirm
Only members of the Encyclopedia advisory board for this topic are allowed to note entries. Would you like to become an advisory board member of the Encyclopedia?
Yes
No
${ textCharacter }/${ maxCharacter }
Submit
Cancel
There is no comment~
${ textCharacter }/${ maxCharacter }
Submit
Cancel
${ selectedItem.replyTextCharacter }/${ selectedItem.replyMaxCharacter }
Submit
Cancel
Confirm
Are you sure to Delete?
Yes No
Academic Video Service