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HandWiki. Diversity Arrays Technology. Encyclopedia. Available online: https://encyclopedia.pub/entry/34293 (accessed on 29 September 2026).
HandWiki. Diversity Arrays Technology. Encyclopedia. Available at: https://encyclopedia.pub/entry/34293. Accessed September 29, 2026.
HandWiki. "Diversity Arrays Technology" Encyclopedia, https://encyclopedia.pub/entry/34293 (accessed September 29, 2026).
HandWiki. (2022, November 14). Diversity Arrays Technology. In Encyclopedia. https://encyclopedia.pub/entry/34293
HandWiki. "Diversity Arrays Technology." Encyclopedia. Web. 14 November, 2022.
Diversity Arrays Technology
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Diversity Arrays Technology (DArT) is a high-throughput genetic marker technique that can detect allelic variations to provides comprehensive genome coverage without any DNA sequence information for genotyping and other genetic analysis. The general steps involve reducing the complexity of the genomic DNA with specific restriction enzymes, choosing diverse fragments to serve as representations for the parent genomes, amplify via polymerase chain reaction (PCR), insert fragments into a vector to be placed as probes within a microarray, then fluorescent targets from a reference sequence will be allowed to hybridize with probes and put through an imaging system. The objective is to identify and quantify various forms of DNA polymorphism within genomic DNA of sampled species. First reported in 2001 by Damian Jaccoud, Andrzej Kilian, David Feinstein, and Kaiman Peng, DArT prioritized significant advantages over other traditional primer-based methods like the ability to analyze large amounts of various samples from a low amount of initial DNA. It also afforded low costs and faster results compared to related solid state DNA arrays that detected Single Nucleotide Polymorphisms (SNPs). Since its inception, the technology has been a major instrument in the analysis of polyploid plants as well as in the construction of physical and genetic map to understand related on species based on similarities and allelic variances among their genomes.

polyploid plants allelic variations genetic map

References

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  2. "Diversity arrays technology: a generic genome profiling technology on open platforms". Data Production and Analysis in Population Genomics. Methods in Molecular Biology. 888. Totowa, NJ: Humana Press. 2012. pp. 67–89. doi:10.1007/978-1-61779-870-2_5. ISBN 978-1-61779-870-2. "Data Production and Analysis in Population Genomics: Methods and Protocols"  https://dx.doi.org/10.1007%2F978-1-61779-870-2_5
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  8. "Validation of the high-throughput marker technology DArT using the model plant Arabidopsis thaliana". Molecular Genetics and Genomics 274 (1): 30–39. August 2005. doi:10.1007/s00438-005-1145-6. PMID 15937704.  https://dx.doi.org/10.1007%2Fs00438-005-1145-6
  9. "Development and assessment of Diversity Arrays Technology for high-throughput DNA analyses in Musa". TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik 119 (6): 1093–1103. October 2009. doi:10.1007/s00122-009-1111-5. PMID 19693484.  https://dx.doi.org/10.1007%2Fs00122-009-1111-5
  10. "A MITE-based genotyping method to reveal hundreds of DNA polymorphisms in an animal genome after a few generations of artificial selection". BMC Genomics 9 (1): 459. October 2008. doi:10.1186/1471-2164-9-459. PMID 18837997.  http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2579443
  11. "A physical map of the 1-gigabase bread wheat chromosome 3B". Science 322 (5898): 101–104. October 2008. doi:10.1126/science.1161847. PMID 18832645. Bibcode: 2008Sci...322..101P.  https://dx.doi.org/10.1126%2Fscience.1161847
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