Epigenetics is identified as the study of heritable modifications in gene expression and regulation that do not involve DNA sequence alterations, such as DNA methylation, histone modifications, etc. Importantly, N6-methyladenosine (m6A) methylation modification is one of the most common epigenetic modifications of eukaryotic messenger RNA (mRNA), which plays a key role in various cellular processes. It can not only mediate various RNA metabolic processes such as RNA splicing, translation, and decay under the catalytic regulation of related enzymes but can also affect the normal development of bone marrow hematopoiesis by regulating the self-renewal, proliferation, and differentiation of pluripotent stem cells in the hematopoietic microenvironment of bone marrow. In recent years, numerous studies have demonstrated that m6A methylation modifications play an important role in the development and progression of hematologic malignancies (e.g., leukemia, lymphoma, myelodysplastic syndromes [MDS], multiple myeloma [MM], etc.). Targeting the inhibition of m6A-associated factors can contribute to increased susceptibility of patients with hematologic malignancies to therapeutic agents.



| Cancer Type | m6A Modifiers | Patients/Cell Lines | Role of m6A in Cancer | Functions | Mechanism | References |
|---|---|---|---|---|---|---|
| ALL | Writers/Erasers | In ETV6/RUNX1-positive ALL patients | oncogene | High levels of m6A “writers” (METTL3, METTL14, WTAP) and m6A “erasers” (FTO and ALKBH5) mRNA expression prior to induction therapy resulted in a high disease burden in ALL patients | Not available | [74] |
| METTL3/METTL14 | In childhood ETV6/RUNX1-positive P-ALL | oncogene | The decreased levels of METTL3 and METTL14 indicate a possible role in the pathogenesis and progression of E/R-positive P-ALL. | Not available | [75] | |
| ALKBH5 | In glucocorticoid (GC)-resistant T-ALL patients/CEM-C1 cells/mice | oncogene | Inhibition of ALKBH5-mediated m6A modification decreased USP1 expression, and downregulation of USP1 ameliorated GC resistance in T-ALL by suppressing Aurora B expression and elevating GR levels | ALKBH5/USP1/Aurora B | [76] | |
| AML | YTHDC1 | In human AML cells/LSCs in vivo in mice | oncogene | YTHDC1 is overexpressed in AML, and it contributes to the proliferation and survival of human HSPCs/AML cells, as well as the self-renewal of leukemia stem cells (LSCs) in mice | YTHDC1/ MCM4 | [77] |
| YTHDC1 | In AML cells | oncogene | nYACs maintain mRNA stability, as well as AML cell survival and undifferentiated state; moreover, nYACs protect m6A-mRNA from degradation by PAXT complex and exosome-related RNAs | YTHDC1-m6A condensates (nYACs) | [78] | |
| YTHDF2 | In leukemic cells in vitro and in mice/in AML patients | oncogene | Overexpressed in t (8; 21)-type AML patients; when YTHDF2 is knocked down, it inhibits tumor cell proliferation in vitro and in mice | AML1/ETO-HIF1α loop/YTHDF2/TNFRSF1b | [79] | |
| YTHDF2 | In mouse and human AML | oncogene | YTHDF2 contributes to the initiation of AML disease as well as proliferation and maintains the overall functional integrity of LSCs | YTHDF2/ TNFR2 | [80] | |
| YBX1/IGF2BPs | Primary human and mouse AML cells in vitro and in vivo | oncogene | Expression of YBX1 is markedly upregulated in myeloid leukemia cells, and YBX1 deficiency greatly induces apoptosis and promotes differentiation while reducing proliferation and impairing leukemic competence of primary human and mouse AML cells in vitro and in vivo | YBX1/MYC/BCL2 (mRNA) | [81] | |
| METTL3 | In MOLM-13 cell lines/recipient mice in vivo | oncogene | METTL3 is highly expressed in AML cells as well as promotes AML cell proliferation and inhibits cell differentiation; m6A modification elevates the translation levels of c-MYC, BCL2, and PTEN gene mRNAs in AML cells | METTL3/c-MYC/BCL2/PTEN (mRNA) | [82] | |
| METTL3 | In AML cells and immunodeficient mice | oncogene | In AML cells, METTL3 promotes tumor cell proliferation and inhibits cell differentiation; downregulation of METTL3 results in the inability of immunodeficient mice to develop leukemia. | CEBPZ/ METTL3/ SP1 | [83] | |
| METTL14 | In normal HSPCs and AML cells | oncogene | METTL14 is overexpressed in AML cells and can block the differentiation of normal myeloid cells and promote malignant hematopoiesis via m6A modifications | SPI1-METTL14-MYB/MYC | [84] | |
| WTAP | In AML patients/WTAP knockout AML cells | oncogene | WTAP promotes AML cell proliferation, tumorigenesis, and inhibits cell differentiation. In addition, WTAP causes chemoresistance in AML cells | WTAP/MYC mRNA | [85] | |
| WTAP | In AML patients or in AML cells in vitro in vivo | oncogene | miR-550-1 leads to a further decrease in WWTR1 stability by downregulating the expression level of WTAP, which ultimately disrupts AML cell proliferation and tumorigenesis | miR-550-1/WTAP/ WWTR1 | [86] | |
| WTAP | In different AML cell lines, e.g., K562 cell line | oncogene | Under the regulation of functional METTL3, the expression of WTAP is upregulated and promotes the proliferation of AML cells | METTL3/WTAP | [87] | |
| FTO | In vitro, in mice, primary patient cells, and TKI-resistant cells | oncogene | SsD inhibits AML cell proliferation and promotes apoptosis and cell cycle arrest via targeting FTO/m6A signaling both in vitro and in vivo | Not available | [88] | |
| FTO | In AMLs | oncogene | FTO enhances leukemia oncogene-mediated cell transformation and leukemogenesis and suppresses all-trans retinoic acid (ATRA)-induced AML cell differentiation and apoptosis | FTO/ASB2, RARA | [89] | |
| FTO | In (R-2HG-sensitive) leukemia cells | oncogene | R-2HG abrogated FTO/m6A/YTHDF2-mediated post-transcriptional upregulation of PFKP and LDHB (two key glycolytic genes) expression, thereby attenuating aerobic glycolysis in leukemia | FTO/m6A/PFKP/LDHB axis | [90] | |
| FTO | In human AML cell lines and AML patients | oncogene | FTO inhibitors, namely FB23 and FB23-2, inhibit proliferation and promote differentiation/apoptosis in human AML cells and primary cells | Not available | [91] | |
| ALKBH5 | In human AML LSCs | oncogene | By regulating the chromatin state of the ALKBH5 locus, the expression of ALKBH5 can be elevated, thereby maintaining leukemogenesis in human AML | KDM4C, MYB, Pol II /ALKBH5/AXL Signaling Axis | [66] | |
| ALKBH5 | In human AML/in LSCs/LICs | oncogene | ALKBH5 not only facilitates the proliferation of AML cells, but also contributes to the self-renewal of leukemic stem/initiating cells (LSCs/LICs) | ALKBH5/TACC3 | [65] | |
| CML | METTL3 | In CML patients/CML cell lines | oncogene | Depletion of METTL3 strongly impairs the translation efficiency of mRNA and contributes to the proliferation of CML cells | METTL3/PES1 protein | [92] |
| METTL3 | PBMCs and CML cell lines | oncogene | Overexpression of NEAT1 inhibits cell viability and promotes apoptosis in CML cells | METTL3/NEAT1/miR-766-5p/CDKN1A axis | [93] | |
| METTL3 | In a mouse model, and in KCL22 and K562 cells | oncogene | Dysregulation of METTL3 promotes chemoresistance and inhibits autophagy in CML cells | LINC00470/METTL3/PTEN mRNA | [94] | |
| DLBCL | m6A regulators | In DLBCL patients | oncogene | In patients with DLBCL, high-risk m6A indicates worse survival when grouped according to prognostic characteristics | Not available | [95] |
| METTL3 | In DLBCL tissues and cell lines | oncogene | METTL3 promotes tumor cell proliferation | METTL3/ PEDF | [96] | |
| WTAP | In xenograft DLBCL models | oncogene | piRNA-30473 facilitates the proliferation of DLBCL cells and induces cell cycle arrest via upregulating WTAP | piRNA-30473/WTAP/HK2 m6A | [97] | |
| MM | ALKBH5 | in MM cells, xenograft models or patients | oncogene | ALKBH5 deficiency induces apoptosis and inhibits the growth of MM cells in vitro | ALKBH5/ TRAF1/NF-κB and MAPK | [98] |
| FTO | in CD138 cells from MM+ | oncogene | IDH2 promotes the growth of myeloma cells in vitro by targeting FTO to regulate the m6A RNA level of MM | IDH2/FTO/WNT7B/Wnt | [99] | |
| HNRNPA2B1 | in MM patients and in MM cells | oncogene | Overexpression of HNRNPA2B1 promotes the proliferation of MM cells in vitro and in vivo | HNRNPA2B1/ILF3 mRNA/AKT3 | [100] | |
| MDS | YTHDC1 | In MDS cells | oncogene | Causes abnormalities in hematopoietic function | YTHDC1/SRSF3 or SRSF10 | [101] |
This entry is adapted from the peer-reviewed paper 10.3390/cancers14020332