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Site-Specific Recombination Techniques: History
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Contributor: Yu Peng

Site-specific recombination techniques use recombinase enzymes and designated DNA recognition sites to generate controlled DNA rearrangements. The enzyme binds compatible sites, forms a recombination complex, and catalyzes strand cleavage and rejoining through covalent protein–DNA intermediates [1]. Accessory factors and DNA organization can regulate formation of the reactive complex and favor a particular direction of recombination [2][3]. Inversion of a DNA segment changes its orientation relative to neighboring sequences and can connect or disconnect coding regions from expression elements [4]. Integration and excision alter the placement or presence of segments within a DNA molecule, contributing to genomic sequence rearrangement. Site position, orientation, and recognition specificity determine the permitted products, while regulation of recombinase expression or activity controls when the reaction proceeds [5].

  • site-specific recombination
  • recombinases
  • DNA recognition sites
  • DNA rearrangement

Molecular Biology Techniques and Applications·Molecular Biology·Biochemistry, Genetics and Molecular Biology·Life Sciences

References

  1. Nigel D.F. Grindley; Katrine L. Whiteson; Phoebe A. Rice; Mechanisms of Site-Specific Recombination. Annu. Rev. Biochem. 2006, 75, 567-605, 10.1146/annurev.biochem.73.011303.073908.
  2. Gretchen Meinke; Andrew Bohm; Joachim Hauber; M. Teresa Pisabarro; Frank Buchholz; Cre Recombinase and Other Tyrosine Recombinases. Chem. Rev. 2016, 116, 12785-12820, 10.1021/acs.chemrev.6b00077.
  3. Xueying Tian; Bin Zhou; Strategies for site-specific recombination with high efficiency and precise spatiotemporal resolution. J. Biol. Chem. 2021, 296, 100509, 10.1016/j.jbc.2021.100509.
  4. P Borst; D R Greaves; Programmed Gene Rearrangements Altering Gene Expression. Science 1987, 235, 658-667, 10.1126/science.3544215.
  5. Gregory D. Van Duyne; Arthur Landy; Bacteriophage lambda site‐specific recombination. Mol. Microbiol. 2024, 121, 895-911, 10.1111/mmi.15241.
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