The pyrazino[1,2-a]indole unit is a tricyclic aromatic nucleus combining an indole and a pyrazine linked by the N5 and C9a atoms. The Synthesis and Biological Activities of Pyrazino[1,2-a]Indole and Pyrazino[1,2-a]Indol-1-One Derivatives is presented.
1. Introduction
The pyrazino[1,2-a]indole unit is a tricyclic aromatic nucleus combining an indole and a pyrazine linked by the N5 and C9a atoms (Figure 1).
Figure 1. Targets of this review and selection of biologically active tetrahydro-pyrazino[1,2-a]indoles 1a, 2a and dihydro-pyrazino[1,2-a]indol-1-ones 3a, 4a.
The access to this substituted aromatic nucleus has been well studied since 1997 by the chemist community from a synthetic point of view and for its potential in medicinal chemistry
[1][2][1,2]. In parallel, structural modifications of the pyrazino[1,2-
a]indole nucleus showed that (3,4-dihydro)pyrazino[1,2-
a]indoles (type A) and (3,4-dihydro)-pyrazino[1,2-
a]indol-1-ones (type B) were efficient pharmacophores used in a variety of diseases. To illustrate, 3,4-dihydropyrazinoindoles
1 [3] and
2 [4] (type A) have been showed to be effective at melatonin and adenosine receptors, while 3,4-dihydropyrazinoindol-1-ones
3 [5] and
4 [6] (type B) have been studied for their anti-viral and anti-allergenic activities, respectively.
2. Recent Synthetic Approaches to Variously Substituted Pyrazinoindoles and 3,4-Dihydropyrazinoindoles
The creation of the pyrazino[1,2-
a]indole nucleus was mainly achieved by cyclizing indole having various groups (CHO, ketone, imine, nitrile, etc.) on C2 with a nucleophile linked to the indole nitrogen atom, thus creating the pyrazino C-ring (
Scheme 1). For example, 2-substituted-1-(prop-2-yn-1-yl)-1
H-indoles
5,
7,
9,
11,
13 transformed into pyrazinoindoles
6,
8,
10,
12 and
14 respectively by intramolecular cyclization using NH
3 in MeOH,
[7][8][9,10] DBU under microwave irradiation,
[9][11] AuCl
3 [10][12] as triple bond activator, Ni(OAc)
2 in the presence of hydroxylamine
[11][13] or NaH in DMF
[12][14].
Scheme 1. Synthesis of pyrazinoindoles.
The C-ring of the pyrazino[1,2-
a]indole system has been also built by alcoholate promoted cyclization of indolodinitrile compound
15 [13][15] and by Curtius reaction using Morita–Baylis–Hillman derivatives
17 [14][16] with good to excellent yields.
The synthesis of variously substituted pyrazinoindoles having a saturated C-ring has been more studied than that of their aromatic counterparts, probably because these compounds offer more functional diversity such as diastereoselective accesses, but mainly because they have shown superior efficacy in medicinal chemistry. Among the simplest reactions described to prepare these compounds was the one proposed by Katritzky, who used a cycloaddition reaction between a
N-ethylamine-indole
19 and formaldehyde in the presence of benzotriazole (Bt) (
Scheme 2). A subsequent nucleophilic substitution reaction of the benzotriazole gives rise to various
N-substituted pyrazinoindoles
20 [15][17].
N-ethylamine-indoles
19 also reacted, in a complementary approach, with aldehydes and Bt in the presence of Lewis acids to give C1-substituted pyrazinoindoles
21 [16][18].
Scheme 2. Synthesis of 1,2,3,4-tetrahydro-pyrazinoindoles.
A Ugi-azide four component approach was recently published to prepare a series of
N-substituted pyrazinoindoles
23 having on C1 a substituted tetrazole ring
[17][19]. Leighton et al. proposed highly enantioselective iso-Pictet–Spengler reactions using the condensation of 2-(1
H-indol-1-yl)ethanamine
24 with a variety of α-ketoamides, followed by the addition of a commercially available chiral silicon Lewis acid (L*) to give 1,1-disubstituted-tetrahydropyrazino[1,2-
a]indoles
25 with good yields (55–90%) and high enantioselectivity (ee = 86–96%)
[18][20]. Guinchard et al. also reported an Au(I)-catalyzed Pictet–Spengler reaction to prepare a variety of complex heterocyclic compounds including tetrahydro-pyrazinoindoles with good yields ranging from 43 to 93%
[19][21]. In 2021, Lacour et al. reported that
N-sulfonyltriazoles
26 and imidazolines
27 reacted under rhodium catalysis to give a variety of hexahydro-pyrazinoindoles
28 with excellent yields easily transformed in tetrahydropyrazinoindoles
29 after a welcome rearrangement in triflic acid TfOH
[20][22]. Ghorai et al. reported in 2018 of an elegant synthesis of 1,3-disubstituted 1,2,3,4-tetrahydropyrazino[1,2-
a]indoles
32 with excellent stereoselectivity (de, ee >99%) via base-mediated ring opening of chiral aziridines
31 with skatoles
30 followed by BF
3-OEt
2 catalyzed Pictet–Spengler reaction
[21][23]. Chandra group reported synthesis of di-substituted pyrazinoindol-4-ones
34 with an excellent diastereoselectivity (>99%) via a Pictet–Spengler reaction by mixing 3-substituted-
N-acylindoles
33 and aromatic aldehydes in the presence of hexafluoroisopropanol (HFIP) under microwave irradiation
[22][24].
3. Biologically Active Pyrazino[1,2-a]indoles
3.1. Neuropsychiatric Properties
Bos et al., in a program dedicated to the discovery of novel drugs for the treatment of neuropsychiatric disorders, synthesized a variety of pyrazino[1,2-
a]indoles
36a–f which were found as partial agonist ligands at the 5HT
2C receptor (
Scheme 3)
[23][25].
Scheme 3. Synthesis of tetrahydro-pyrazinoindoles 36 and their binding data at the 5HT2C receptor subtype.
Pyrazinoindole derivatives
36a–f were prepared according to a
N-alkylation/cyclization/reduction sequence of indoles
35 having an ester function on C2
[23][25]. Pyrazinoindoles
36 were found to be partial agonists at the 5HT
2C receptor subtype binding with a higher affinity than for 5HT
2A receptors. Best affinities for 5HT
2C receptor were observed for 10-methoxy-pyrazinoindoles having on 6, 7, 8 or 9-position of the A-ring bulky atoms (F < Me < Cl < Br). In animals,
36d showed a 30-fold selectivity for 5HT
2C receptors compared to 5HT
2A receptors and an only 3-fold selectivity compared to 5HT
1A receptors. In vivo results (rats and monkeys) also demonstrated that pyrazinoindole
36d had a promising therapeutic potential for the treatment of various psychiatric disorders, such as obsessive-compulsive disorders, panic anxiety or depression.
Imidazoline receptors exist in two forms, I
1 and I
2, for which there are very few ligands that are selective for one of the two forms. As a result, it is very difficult to assign a well-defined role to them even though I
2 receptors have been described as involved in a variety of CNS disorders. Tetrahydro-pyrazinoindoles
37a–c were evaluated by Glennon group for their potential as I
2 imidazoline receptor ligands
[24][26] due to their resemblance to β-carbolines
[25][27] and imidazo-pyridoindoles (
Figure 2)
[26][28].
Figure 2. Tetrahydro-pyrazinoindoles 37 and their binding data at I2 and α-adrenergic receptors.
Remarkably, 8-methoxypyrazinoindole
37c binds to I
2 receptors with high affinity (
Ki = 6.2 nM) and has a 1500-fold selectivity for I
2 receptors compared to α2-adrenergic receptors (
Ki = 9550 nM) and a 1000-fold selectivity for I
1 receptors. A similar high selectivity for
37c was also observed towards I
2 receptors compared to serotonin 5HT
2A and 5HT
2C receptors.
Zlotos et al. synthesized a series of C1-substituted tetrahydro-pyrazinoindoles
1 and
39 as novel potent melatoninergic ligands from
38 in 4 steps (
Scheme 4)
[3].
Scheme 4. Synthesis of tetrahydro-pyrazinoindoles 1 and 39.
The affinity of pyrazinoindoles
1,
39a,
b for human MT1 and MT2 melatonin receptors in Chinese Hamster Ovary (CHO) cells was measured by competition binding analysis using 2-[
125I]-iodomelatonin. The most active compound
39a was found to be an interesting ligand for MT1 and MT2 receptors with excellent affinity, but with no subtype selectivity (MT1: Ki = 6.6 nM; MT2: Ki = 6.9 nM, respectively). This tetrahydro-pyrazinoindole compound was found to be a partial agonist at MT
1 receptors and possessed no intrinsic activity at MT
2 receptors. It is noteworthy that the treatment of pyrazinoindole 7 (R = H) with MeI gave the corresponding
N-dimethyliodonium salt which was found to displace [
3H]-cytisine from the nicotinic binding sites on rat cerebral cortex and was revealed to be a nicotinic agonist ligand
[27][29].
3.2. Auto-Immune Properties
Among the C1-substituted pyrazinoindoles, we can cite the work of Buzard et al. who prepared a series of C3-tetrahydro-pyrazinoindoles
42 from the same precursor
41 resulting from an intramolecular Michael reaction carried out on mesylate
40 in the presence of NH
3 (
Scheme 5)
[28][30]. In a previous work, Buzard et al. showed that some cyclopenta[
b]indoles were very potent agonists of the sphingosine 1-phosphate (S1P
1) receptor that could be used for the treatment of certain autoimmune diseases
[29][31]. Due to the structural resemblance to these indoles, a series of tricyclic analogues (pyridoindoles, oxazinoindoles and pyrazinoindoles) were designed, synthesized, and evaluated. Pyridoindoles proved to be the most promising compounds in this series of fused-indole compounds, even if pyrazinoindoles
42a–d, prepared from
41 in four steps (
N-Boc protection,
O-debenzylation,
O-functionalization with various benzyl chlorides and
t-Butylester hydrolysis) showed interesting activities as S1P
1 receptor agonists with nanomolar EC
50 values. For the treatment of autoimmune disease as rheumatoid arthritis, Hill et al. synthesized a pyrazinoindole derivative having on C10 a substituted maleimide nucleus which was unfortunately found to be poorly active as protein kinase C inhibitor (IC
50 = 540 nM)
[30][32].
Scheme 5. Synthesis of tetrahydro-pyrazinoindole 41 and human S1P1 cAMP EC50 values of derivatives 42a–d.
3.3. Anti-Bacterial and Anti-Fungal Properties
A series of 15 pyrazinoindoles
43 were prepared according to Refs.
[15][16][17,18] (see
Scheme 2) by Verma group and evaluated for their anti-bacterial properties (
Table 1)
[31][33]. The in vitro antibacterial activity was evaluated by disc diffusion assay (DDA) using pathogenic strains of
Staphylococcus aureus,
Salmonella typhi,
Streptomyces thermonitrificans,
Pseudomonas aeruginosa and
Escherichia coli. It was demonstrated that
43a was only active on
P. aeruginosa and, similarly, a significant activity on
P. aeruginosa and
S. thermonitrificans was noticed with
43b. Pyrazinoindoles
43c–e were found to be active against all tested strains but with a relatively modest efficacy when compared with gentamycin. From these results, it seems that the presence of substituents on the nitrogen atom of pyrazinoindoles is deleterious for a satisfactory anti-bacterial activity. Pyrazinoindoles having an aromatic C-ring were not active against all tested strains.
Table 1. Anti-bacterial properties of tetrahydro-pyrazinoindoles 43a–f.
| Cpnd |
|
| DDA Minimum Inhibitory Concentrations (μg/disc) |
|
|
| S. aureus |
|
| S. typhi |
|
| P. aeruginosa |
|
| S. thermonitrificans |
|
| 43a |
|
| - |
|
| - |
|
| 3.75 |
|
|
60 |
|
|
Gentamycin |
|
| 1 |
|
| 1 |
|
| 0.5 |
|
| 1 |
|
Tetrahydro-pyrazinoindoles
43 were also evaluated for their anti-fungal activity against
Aspergillus flavus,
Aspergillus fumigatus,
Aspergillus. niger and
Candida albicans (
Table 2)
[32][34]. The anti-
Aspergillus activity was evaluated by disc diffusion assay (DDA) and the anti-
Candida activity was investigated by microbroth dilution assay. The more active tetrahydro-pyrazinoindoles
43 presented in
Table 2 displayed a mild to moderate anti-fungal activity, even if these pyrazinoindoles were found to be, in vitro, less cytotoxic than Amphotericin B when used at high concentrations. SARs with compounds
43 were similar for both anti-bacterial and anti-fungal activities.
Table 2. Anti-fungal properties of tetrahydro-pyrazinoindoles 43g–I and 43c.
| Cpnd |
|
| DDA Minimum Inhibitory Concentrations (μg/disc) |
|
|
| A. flavus |
|
| A. fumigatus |
|
| A. niger |
|
| C. albicans |
|
| 43g |
| - |
|
| 11.7 |
|
| 5.8 |
|
| 11.7 |
|
| 15.6 |
|
| 43b |
|
| 43h |
| - |
|
| 47 |
| - |
|
| 23 |
| 15 |
|
|
| 47 |
| 3.75 |
|
| 62.5 |
|
| 43c |
|
| 43i |
| 30 |
|
| 30 |
|
| 18794 |
| 30 |
|
| 7.5 |
|
|
|
|
| 187 |
|
| 125 |
|
| 43d |
|
| 15 |
|
| 60 |
|
| 60 |
|
| 43c |
|
| 47 |
|
| 47 |
|
| 47 |
| 60 |
|
| 125 |
|
| 43e |
|
| 15 |
|
| Gentamycin |
| 30 |
|
|
| 1 |
|
| 1 |
|
| 60 |
|
| 0.5 |
| 30 |
|
|
| 1 |
|
| 43f |
|
| - |
|
| - |
|
| 60 |
|
|
3.4. Anti-Arrhythmic, Anti-Lipolytic, Neuro- and Cardio-Protective Properties
In a program dedicated to the discovery of ligands able to activate the A
1AR adenosine receptor, Romagnoli et al. proposed some derivatizations on PD81,723, an allosteric modulator acting at the A
1AR receptor, enhancing the functional effects of adenosine receptor subtype (
Scheme 6)
[4].
Scheme 6. Synthesis of tetrahydro-pyrazinoindoles 2, 46a–c and effect in cAMP assay in hA1CHO cells.
Thus, pyrazinoindoles
2,
46a–d were synthesized from dibromothiophene
45 and 8-substituted pyrazinoindoles
44 in 3 steps (S
N2 reaction, debromination, phthalimide hydrolysis). Pyrazinoindoles
2,
46a–c were next evaluated in a functional assay for their ability to inhibit forskolin stimulated cAMP production via the hA
1-AR in intact Chinese hamster ovary (CHO) cells. The four pyrazinoindoles
2,
46a–c were found to be significantly more active than the reference PD 81,723. The best compound 8-fluorated pyrazinoindole
46a inhibited the percentage of cAMP production by 69% vs. 18% for PD 81,723. It was also shown that these derivatives significantly inhibited antagonist binding at the hA
1AR, hA
2AR or hA
3AR receptors.
3.5. Anti-Cancer Properties
Romagnoli et al. studied in 2009 the antiproliferative properties of a series of pyrazinoindoles
17 which were prepared from the reduction/cyclization of
N-cyanomethyl derivatives
47 followed by an oxidation reaction using MnO
2 (
Scheme 7)
[33][35].
Scheme 7. Synthesis and anti-cancer properties of a selection of pyrazinoindoles 49a–c.
It was shown that pyrazinoindole
49a was the more cytotoxic derivative against human leukemia K562 cancer cells with a promising IC
50 value of 0.07 μM. However, this strong cytotoxicity was not observed in other cell lines such as murine leukemia (L1210), murine mammary carcinoma (FM3A), human T-lymphoblastoid (Molt/4 and CEM) and human cervical carcinoma (HeLa) cells with IC
50 values superior to 20 μM.
In view of preparing pyrazinoindoles
51 as anti-cancer agents, Kumar et al. mixed
N-propargyl indoles
50 having an aldehyde function on C2 with (2-aminophenyl)methanol derivatives in the presence of a catalytic amount of AgNO
3 (
Scheme 8)
[34][36]. After the reaction of δ-alkynyl aldehydes and nucleophilic anilines, the alcohol function adds on the imine thus creating a second bond (C-O). The third bond creation (C-N) of this process occurs with the nitrogen atom of the imine which reacts with the alkyne triple bond activated by AgNO
3 in a 6-
exo-
dig manner (76–84%).
Scheme 8. Synthesis of pyrazinoindoles 51 and their IC50 values against three human cancer cell lines.
Pyrazinoindoles
51 were next evaluated against 3 cancer cell lines (K562 leukemia cells, BT-474 human breast cells; MCF-7 breast cancer cells). As it can be seen in
Scheme 8, the more cytotoxic compound was
51a against K562 and BT-474 cancer cells. This pyrazinoindole was significantly more active than 4OH-tamoxifene, used as reference compound, against K562 and BT-474 cells but displayed a lower IC
50 value against MCF-7 cancer cells. This result is interesting as
51a exhibited maximum cytotoxicity in p53-deficient cell lines K562 and BT-474 cells but not in p53 wildtype MCF-7 cells. It would certainly be interesting to perform SARs on these structures and to evaluate them on a panel of human cancer lines resistant to the usual treatments.