3. Biosynthetic Pathways and Gene Involved in Mellein Production
Isocoumarins, 3,4-dihydroisocoumarins and melleins belong to the class of secondary metabolites named polyketides. Considering their activities and their biological roles, this class of natural compounds is one of the major secondary metabolite classes. In general, they occur in fungi, plants, bacteria and marine organisms. Isocoumarines, 3,4-dihydroisocoumarins and melleins show a common biosynthetic origin: they are related to the fatty acid biosynthesis, which reactions are catalyzed by enzymes named polyketides synthase (PKS)
[110109].
The possible sequence of reactions involved in their biosynthesis is outlined in . Starting form malonyl-CoA and successive Claisen condensation with 4 acetyl-CoA moieties, pentaketide (I) is generated. This reaction initially produces a β−chetoester, and then the ketonic group is reduced after each stage of condensation and before the subsequent phase of chain elongation
[110109]. Pentaketide (I) might be involved in different reactions: (i) Further chain elongation, spawning the heptaketide (II). Post-PKS modification of II may result in a variety of more complex isocoumarines or 3,4-dihydroisocoumarins. (ii) Cyclization reaction, which produces the typical six-membered lactone ring synthetizing 6-hydroxymellein (III). Further modification of III my include aromatization, generating 6,8-dihydroxy-3-methylisocoumarin, or 6-OH dehydration, forming mellein
[109][110][111].
Figure 4. Possible reactions involved with isocoumarines, 3,4-dihydroisocoumarins and melleins biosyntheses.
From detailed investigations of genes, amino acid sequences and mechanistic analogies of the enzymes, were possible to identified three general types of PKS: (i) type I, which are very big multifunctional proteins with a single domain. Furthermore, they can also be divided into iterative and non-iterative enzymes; (ii) type II, composed by complex, single, monofunctional proteins; (iii) type III, which differ from the other two by being homodimeric proteins that use a single active site to perform the series of decarboxylation, condensation, cyclization and aromatization reactions. PKS type III are found in plants, bacteria and fungi, PKS type I are typical of bacteria and fungi, while type II are limited to bacteria. Aromatic polyketides, such as melleins, are typical products of PKS type II or type III, although there are some examples of PKS type I capable of producing aromatic rings
[110109]. As reviewed in the previous section melleins are mainly produced by pathogenic fungi. Melleins, and more in general polyketides, play a wide range of roles: host-pathogen interaction, facilitations of the host colonization, phytotoxicity
[112111]. Almost all fungal PKS currently known are type I systems, while some fungi also possess type III PKS
[113112]. Nevertheless, the fungal type I PKS differs from bacterial type I in being iterative
[110109][113112]. Fungal PKS have different domains: (i) no reductive PKS (nrPKS) with no reductive steps during chain construction, (ii) partially reducing PKS (prPKS), that usually catalyzes only one reduction during chain extension and (iii) highly reducing PKS (hrPKS) where the level of reduction is varied and clearly subject to a high level of genes expression control
[113112].
Fungi usually have 20–50 secondary metabolites genes and their production is highly regulated often in response to specific biotic factors and environmental perturbations. Modern genomic and transcriptomic tools can be used, for pathogenic fungi, to probe the expression of secondary metabolites gene clusters at various stages of infection
[113][114][115]. Unfortunately, the absence of whole genome sequences slows down the identification of these target genes.
Focusing our attention on genes sequences and characterized PKS enzymes involved in melleins production in fungi, very little it is available in literature so far.
Saccharopolyspora erythraea, an actinomycete that produces a polyketide with antibiotic activity named erythromycin A was studied
[116115]. The modular PKS appointed for the biosynthesis of erythromycin A was studied as model for polyketide synthesis. The genome of
S. erythraea revealing a dozen of PKS genes. One of the uncharacterized PKS genes was SACE5532, which encodes a single-module PKS that have sequence homology with several fungal and bacterial type I prPKSs for aromatic polyketide biosynthesis. The product of SACE5532 was identified as (
R)-(-)-mellein (
1), and the different domains of this prPKS were studied and characterized. The experimental results confirmed the polyketide origin of
1 and might ease the identification of the biosynthetic genes for other dihydroisocoumarins
[116115].
More recently, the sequence of fungal PKs involved in (
R)-(-)-mellein (
1) synthesis in wheat pathogenic fungus
Parastagonospora nodorum was reported and the gene, involved in the production of
1 by the wheat pathogen
P. nodorum, was studied
[117116]. The results showed that SN477 was the most highly expressed PKs gene
in planta, and analysis of the DNA sequence indicated that it codes for typical prPKS and was similar with an identical domain architecture to the prPKS ATX from
Aspergillus terreus, which synthesizes 6-MSA. These results were confirmed by heterologous expression of SN477 in yeast. The gene knock-out SN477 resulted in a
P. nodorum mutant that was not capable of producing (
R)-mellein as shown by HPLC metabolic profiling. Thus, SN477 is the first fungal prPKS producing a PKs compound except 6-MSA. However, its biosynthesis was highly parallel to that of 6-MSA but needed additional chain elongation and keto reduction steps
[117116].
Social insects have developed strong antimicrobial defenses against infection of pathogens and parasites. Indeed, antimicrobial compounds have been identified in
Reticulitermes speratus (Kolbe) organic extracts. Mitaka and his colleagues (2019) identified (
R)-(-)-mellein (
1) using GC-MS analysis. Antifungal assays showed that compound
1 has an inhibitory effect on the growth of
Metarhizium anisopliae and
Beauveria bassiana. These results suggest that
R. speratus use (
R)-(-)-mellein (
1) to fight the pathogenic fungi; unfortunately the termite-egg-mimicking fungus has resistance against
1 [117].
2.4. Melleins from Bacteria
Only one article on (R)-(-)-mellein (1) produced by bacteria is available. Volatile compounds released by 50 bacterial strains have been collected, and the obtained headspace extracts were analyzed by GC-MS, which is a fundamental tool for the discovery of natural compounds that might be missed by using traditional techniques [118].
Furthermore, Saccharopolyspora erythraea was found to produce compound 1 for the first time. Aside from (R)-(-)-mellein (1), other insect pheromones such as methyl 6-methylsalicylate, methyl 6-ethylsalicylate, pyrrole-2-carboxylate, conophthorin and chalcogran were produced by bacteria strains. Considering the symbiotic relationships between actinomycetes and insects, further investigations should be performed on the origins of these compounds in these species [118].