1. Introduction

Nitrogenase

is a unique system able to convert N

₂

to NH

₃ ^[1]. Total cost of N

[27]. Total cost of N

₂

reduction corresponds to eight electrons being transferred and 16 MgATPs being hydrolyzed. Three classes of

nitrogenase differ in the heteroatom present in the active site metal cluster (Mo, V or Fe), but the Mo-dependent nitrogenase is the most important and best-studied enzyme ^[2]. It contains two metallo-components,

differ in the heteroatom present in the active site metal cluster (Mo, V or Fe), but the Mo-dependent nitrogenase is the most important and best-studied enzyme [40]. It contains two metallo-components,

dinitrogenase

(molybdenum–iron (MoFe) protein) and

dinitrogenase reductase (Fe protein), which associate and dissociate in a catalytic cycle also requiring a reducing source and MgATP ^[3]. The MoFe protein contains two metal clusters: the iron–molybdenum cofactor (FeMo-co) ^[4], which provides the active site for substrate binding and reduction, and a P-cluster, involved in electron transfer from the Fe protein to FeMo-co ^[5]. The FeMo cofactor is thus the key element for the mechanism of N

(Fe protein), which associate and dissociate in a catalytic cycle also requiring a reducing source and MgATP [41]. The MoFe protein contains two metal clusters: the iron–molybdenum cofactor (FeMo-co) [42], which provides the active site for substrate binding and reduction, and a P-cluster, involved in electron transfer from the Fe protein to FeMo-co [43]. The FeMo cofactor is thus the key element for the mechanism of N

₂ fixation. It also contains an interstitial carbon atom ^[6] which is key for the CO

fixation. It also contains an interstitial carbon atom [44] which is key for the CO

₂

conversion mechanism, providing stability to the complex.

Figure 1

a reports the model of the FeMo cofactor, while

Figure 1

b shows the proposed mechanism of N

₂ fixation ^[1].

fixation [27].

Figure 1.

a

b

₂ fixation on FeMo-co. Adapted from ^[1]. Not subject to US copyright.

The key features of this mechanism ^[7][8][45,46] are:

• A specific binding site for N₂ able to first accept four electrons/protons to form two [Fe–H–Fe] bridging hydrides,
• coordination of N₂ on two iron atoms with simultaneous reductive elimination of H₂,
• multi-electron/proton transfer to a coordinated undissociated N₂ molecule to form a N₂H₂ molecule stabilized by interaction with two iron atoms,
• further multi H⁺/e⁻ transfer to form an end-on N₂H₄ coordinated molecule,
• further steps of H⁺/e⁻ transfer with stepwise release of ammonia.

(i)

A specific binding site for N₂ able to first accept four electrons/protons to form two [Fe–H–Fe] bridging hydrides,

(ii)

coordination of N₂ on two iron atoms with simultaneous reductive elimination of H₂,

(iii)

multi-electron/proton transfer to a coordinated undissociated N₂ molecule to form a N₂H₂ molecule stabilized by interaction with two iron atoms,

(iv)

further multi H⁺/e⁻ transfer to form an end-on N₂H₄ coordinated molecule,

(v)

further steps of H⁺/e⁻ transfer with stepwise release of ammonia.

 

2. Mechanisms in Nitrogenase

The simultaneous electron/proton transfer to an undissociated coordinated N

₂ molecule is a different feature regarding the mechanisms in iron catalysts for the high-temperature/pressure HB (Haber-Bosch) process, where the first (rate-limiting) step is the dinitrogen dissociative chemisorption followed by sequential hydrogenation of the intermediates ^{[9][10][11][12]}. The reason for the difference in the mechanism is that the nitrogen molecule dissociation path, in principle, is preferable as sequential steps of electron transfer and hydrogenation of the nitrogen adatoms. However, the strongly bound nitrogen species formed by dissociation require high temperatures to avoid catalyst inhibition, and, therefore, there is a need for high-pressure operations (as this is an exothermic reversible reaction). For the undissociated N

molecule is a different feature regarding the mechanisms in iron catalysts for the high-temperature/pressure HB (Haber-Bosch) process, where the first (rate-limiting) step is the dinitrogen dissociative chemisorption followed by sequential hydrogenation of the intermediates [47,48,49,50]. The reason for the difference in the mechanism is that the nitrogen molecule dissociation path, in principle, is preferable as sequential steps of electron transfer and hydrogenation of the nitrogen adatoms. However, the strongly bound nitrogen species formed by dissociation require high temperatures to avoid catalyst inhibition, and, therefore, there is a need for high-pressure operations (as this is an exothermic reversible reaction). For the undissociated N

₂ molecule activation, sequential electron and proton transfer steps would generate high-energy intermediates ^[13]. For example, adding one electron and one proton to N

molecule activation, sequential electron and proton transfer steps would generate high-energy intermediates [51]. For example, adding one electron and one proton to N

₂

to form a N

₂

H* species requires −3.2 V vs. normal hydrogen electrode (NHE). For multi-electron reduction processes, for example, to produce N

₂

H

₅⁺

adspecies, the reduction potential becomes −0.23 V. Multi-electron reactions are thus necessary in the low-temperature profile, in agreement with what was observed for

nitrogenase

, and to avoid/minimize the side reaction of H

⁺

/e

⁻

recombination to form H

₂

, which is also possible in the enzyme path.

As a slight change, more recent indications in the mechanism ^[14][52] instead suggest the formation of a Janus intermediate, i.e., the formation of a symmetric hydride structure with a subsequent diazene intermediate (Figure 2).

Figure 2.

₂ fixation and structure of nitrogenase FeMo-co. Adapted from ^[14]. Copyright 2021 Elsevier.

Nitrogenase, particularly in the vanadium form ^[15], can also catalyze the reductive carbon–carbon coupling of COx into hydrocarbon products. This is also a unique feature and suggests a role of this enzyme as an evolutionary link between the nitrogen and carbon cycles on Earth ^[16]. The mechanism of C-C coupling is not clear, but progress has been made recently ^[17]. From CO

, particularly in the vanadium form [53], can also catalyze the reductive carbon–carbon coupling of COx into hydrocarbon products. This is also a unique feature and suggests a role of this enzyme as an evolutionary link between the nitrogen and carbon cycles on Earth [28]. The mechanism of C-C coupling is not clear, but progress has been made recently [54]. From CO

₂

, the mechanism involves a first step of reduction of CO

₂

to CO by the Fe protein ([Fe

₄

S

₄

]

⁰

) of

nitrogenase ^[18], followed by the reductive carbon–carbon coupling of two coordinated CO molecules on the same active site of the

[55], followed by the reductive carbon–carbon coupling of two coordinated CO molecules on the same active site of the

nitrogenase

cofactor proposed for N

₂

fixation (M-cluster). The tentative mechanism is presented in

Figure 3

.

Figure 3.

a

₄

₄

₄

₂

₂ to hydrocarbon (HC) conversion. Adapted from ^[16]. Copyright 2016 Wiley. (

b

The same Janus intermediate proposed for N₂ fixation (symmetric hydride structure) reacts with two CO molecules (produced on the Fe protein) to form an ethyne-like intermediate which can be hydrogenated to ethylene or could react further to form a ferracycle (formed by C₂H₄ binding to one of the Fe atoms ^[19][56]), leaving the other Fe free to form other Fe-hydride species and further coordinate CO, which can react with the ferracycle species, to give C2 products (hydrocarbon, oxygenated chemicals) (Figure 4).

Figure 4. Proposed schematic mechanism of the active sites in FeMo cofactor for conversion of C2 intermediate to C3 products (hydrocarbon, oxygenates) via formation of a ferracycle species.