2.2. Epigenetics
The complex regulation of autonomous aldosterone secretion not only includes an altered transcriptional regulation, but also involves further mechanisms such as DNA methylation and the effects of microRNAs.
In general, APAs present hypomethylation of several genes, in part already recognized as presenting transcriptional alterations. The gene with the most frequently hypomethylated promotor is
CYP11B2, aldosterone synthase. In detail, the CpG island in the promotor region of
CYP11B2 has been found to be hypomethylated in APAs, but not in blood samples of the same patients [
83]. Similarly, hypomethylation of
CYP11B2 was not observed in the adjacent adrenal tissue [
84,
85]. Additionally, the hypomethylated region of
CYP11B2 has not been proven to be induced by the
KCNJ5 or
ATP1A1 mutations [
86].
CYP11B2 hypomethylation in APAs with parallel hypercortisolemia was unchanged; however, these tumors also presented
CYP11B1 promoter hypomethylation, especially at two CpG sites near the Ad1/cAMP response element binding site [
87]. Furthermore, lower methylation levels of
CYP11B2 are documented in APAs compared to APMs, suggesting a role of demethylation in a possible APM to APA transition [
85].
In addition to these hypomethylated genes, APAs present hypomethylation in other differentially expressed genes, as presented above. In particular, the G-coupled-protein receptors
PCP4, HTR4, MC2R, PTGER1 showed hypomethylation in APAs [
71,
88].
PCP4, one of the genes highly expressed in APAs, presented as one of the most hypomethylated genes in APAs [
88]. In a study applying integration of transcriptome and methylome analysis in APAs and the adjacent adrenal gland, 34 genes presented upregulation with parallel CpG hypomethylation. These include aldosterone-related genes (
CYP11B2, MC2R and hemopexin (
HPX)) as well as genes related to tumorigenesis (
PRRX, member RAS oncogene family (RAB38), fibroblast activation protein alpha (
FAP), Glucosaminyl (N-Acetyl) Transferase 2 (I Blood Group) (
GCNT2)) and to differentiation (Calmodulin-like Protein 3 (
CALML3)) [
84]. Inversely, hypermethylation of
AVPR1 and Protein Kinase C alpha (
PRKCA) has been observed in APAs in comparison to normal adrenal glands [
83]. Thus, not only is
CYP11B2 hypomethylated in APAs, but several molecules related to
CYP11B2 expression present differential methylation levels as well.
Unlike APAs, ACCs present global hypomethylation when compared to normal and benign tissues. In comparison with benign samples, ACCs present differential methylation status of several CpG sites, including those associated with Insulin Like Growth Factor 2 (
IGF2) and H19 Imprinted Maternally Expressed Transcript (
H19), Tumor Protein P53 (
TP53), and
CTNNB1. Interestingly, hypermethylation in both ACCs and benign samples has been documented for genes involved in apoptosis and transcriptional and cell cycle control, in particular for Cyclin Dependent Kinase Inhibitor 2A (
CDKN2), ATA Binding Protein 4 (
GATA4), Histone Deacetylase 10 (
HDAC10), PYD And CARD Domain Containing (
PYCARD), and Secretoglobin Family 3A Member 1 (
SCGB3A1) [
89].
Several microRNAs were identified in APAs as modulators of
CYP11B2 expression and are responsible for the differential regulation of other aldosterone production relevant genes as well. Among others, miR-24 was significantly downregulated in APAs in comparison to normal adrenal glands [
90], while its levels were found to be significantly lower in APAs with
KCNJ5 mutations than in those without. In parallel, a significant negative correlation of this microRNA with the expression levels of its target gene, Glutamate Receptor interacting protein 1 (
GRIP1), has been demonstrated, possibly posing this gene as a candidate factor for aldosterone autonomy [
91].
2.3. Metabolomics
One of the oldest approaches to investigating metabolome differences in APAs began decades ago with the initial observation that a patient with APA had elevated C-18-oxygenated steroids [
95]. Later studies confirmed the observation that patients with APAs had elevated 18-hydroxycortisol and 18-oxocortisol, while patients with BAH did not present this laboratory phenotype [
96]. As a next step, the quantification of these two steroids in the adrenal veins of patients with PA undergoing adrenal vein sampling (AVS) took place and an elevated 18-oxocortisol/cortisol ratio was found, indicating the dominant site in the AVS and allowing differentiation of patients with APAs from patients with BAH [
97]. In an attempt to develop a less invasive testing method, urinary 18-hydroxycortisol levels were used with sufficient diagnostic accuracy to distinguish APAs from BAHs [
98]. Several metabolic adaptations have since been described in tumorigenesis, with tumor cells undergoing metabolic reprogramming in order to address increased metabolic demands and enhance progression. Characteristic examples include increased glucolysis in cancer cells (the Warburg effect) and the dysregulation of lipid oxidation with increased β-oxidation and subsequent increased NADPH (also critical for adrenal steroidogenesis) with enhancement of CYP11A1 and CYP11B2 activity, possibly leading to increased aldosterone synthesis [
75].
The introduction of liquid chromatography with tandem mass spectrometry (LC-MS/MS) in the quantification of adrenal steroids confirmed the previous data, and additionally widened the spectrum of investigated steroids. In addition to the clear elevation of plasma 18-oxocortisol in APAs, increased levels of plasma cortisol, corticosterone, dehydroepiandrosterone (DHEA) and DHEA-S were documented in patients with BAH [
99,
100]. The combination of peripheral venous steroid profiles with the imaging data from CT or magnetic resonance imaging (MRI) has improved the diagnostic accuracy of correct subtype classification of PA.
Distinct patterns of urinary metabolites were observed in another study, enabling the grouping and distinguishing of essential hypertensives from PA patients and of APA from BAH patients. The identified metabolites include pyrimidine nucleoside and precursors, purine nucleotides and catabolites, and
Targeted metabolomics of blood samples of patients with endocrine hypertension (PA, Cushing syndrome, pheochromocytoma/paraganglioma) and essential hypertension can distinguish between the two groups and has identified four metabolites as being common discriminators of the two disease groups, namely the long-chain acylcarnitines C18:1, C18:2, ornithine, and spermidine [
107].
Finally, a proteomic and phosphoproteomic profiling of APAs in comparison to adjacent adrenal tissue demonstrated that increased steroidogenesis in APA positively correlates with the upregulation of the respective steroidogenic enzymes (
CYP11B2, CYP21A1, HSD3B2) and their phosphorylation, without any increase in the mitochondrial enzymes providing the energy for the catalyzation of these reactions. Furthermore, the same study identified two distinct protein expression patterns, one common for
KCNJ5 tumors and their adjacent adrenal tissue and another for wild-type APAs for
KCNJ5 and their controls. This study also documented altered extracellular matrix composition in APAs and identified overexpression of Ras Homolog Family Member C (RHOC), an actin-organizing factor, in APAs along with deregulation of the mechanistic target of the rapamycin (mTOR) signaling pathway in these tumors [
109].