Telomerase Reverse Transcriptase in Leukemia: History
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Subjects: Hematology
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Yik Mot

Telomerase reverse transcriptase (TERT) has been established to possess diagnostic value in leukemia as most adult cells do not express high levels of telomerase. Indeed, studies have shown that prognosis is not favorable in patients who have leukemias expressing high levels of telomerase. Recent research has indicated that targeting of this gene is able to control the survival of malignant cells and therefore offers a potential treatment for TERT-dependent leukemias. 

  • hTERT
  • leukemia
  • gene regulation
  • cancer
  • hematological malignancy

1. Introduction

The human telomerase reverse transcriptase gene (hTERT) spans over a 40 kb DNA region and consists of 16 exons and 15 introns [1]. This gene produces a polypeptide with a length of 1132 amino acids which is then transformed to a 130kD functional TERT protein [2]. The four critical functional domains in TERT comprise the N-terminal regulatory domain, the RNA binding domain, the reverse transcriptase domain, and the C-terminal dimerization domain [3]. Owing to its complexity, TERT is regulated at various levels which include transcriptional, post-transcriptional, and post-translational mechanisms [4][5][6].

The primary function of this protein is in the maintenance of telomere length. Telomeres cap the ends of chromosomes with repetitive 5′-TTAGGG-3′ conserved sequences to maintain the integrity of genetic information [7]. With each successive round of cell proliferation, 50 to 200 base pairs of DNA material are dissociated from the ends of the chromosomes due to the loss of RNA primers situated on the lagging strand of Okazaki fragments. This phenomenon leads to the progressive shortening of telomeres which limits the potential of somatic cells to divide [8][9]. Certain cell types, such as stem cells and cancer cells, are able to express telomerase to replenish telomeric ends, thereby permitting continuous self-renewal [10][11][12]. Telomerase exerts its DNA polymerizing function through the formation of a complex consisting of two main subunits: the catalytic protein hTERT and the human telomerase RNA component (hTERC) subunit [13].

2. Transcriptional Regulation of TERT

The promoter of TERT is a very dynamic region. It is GC rich and lacks the TATA or CCAAT recognition sequence for the transcription start site (TSS) location by RNA polymerase 11. However, this is compensated for by an initiator like CCTCTCC sequence. It also contains two E boxes for Myc binding, several GC boxes for Sp1 binding, and a CCAC box [6]. These motifs make the promoter region an excellent hub for the binding of various repressors and activators [5][6].

2.1. Negative Transcriptional Regulators of TERT

Negative transcriptional regulators of TERT can either bind directly to the promoter or interact by forming complexes to downregulate TERT expression. Direct acting repressors include retinoblastoma (RB), myeloid-specific zinc finger protein (MZF2), activator protein 1 (AP1), Wilms tumor 1 (WT1), and menin [14][15][16]. Transcriptional repressors exert their effect on TERT expression by forming complexes and interacting with other proteins including Mad1, the HTLV-1 oncogene TAX, tumor suppressors BRCA1/Nmi and p53, interferon regulatory factor 1 (IRF1), and transforming growth factor β (TGFβ) [17][18][19][20][21]. Mad1 has been identified to form a complex with Max (Mad1/Max) and binds to the E box region located at the promoter to prevent TERT expression [17][22][23]. Similarly, it was found that TAX also represses TERT expression by E-box binding [18]. Receptor Ck, on the other hand, has been determined to regulate TERT via interactions with protein kinase C [24].

2.2. Positive Transcriptional Regulators of TERT

Positive transcriptional regulators also function via direct and indirect interactions with the promoter region to activate TERT expression. Positive regulators that act directly include human N-acetyltransferase like protein (hALP), transcriptional elements interacting factor (TEIF), signal transducer and activation of transcription 3 (STAT3), the oncoproteins Ews-ETS, hypoxia inducible factor 1 (HIF1α), and the transcription factor c-Jun [5]. Activators that act indirectly include the c-Myc oncogene, the apoptosis inhibitor survivin, and the viral oncogene E6/NFX1. The oncogene c-Myc activates TERT expression by forming a complex with max (c-Myc/Max) and binding to the E-box region whilst survivin acts via SP1/c-Myc binding. The viral oncogene E6/NFX1 on the other hand induces TERT expression by p53 degradation, activation of c-Myc, and disruption of upstream stimulatory factor (USF) based repression [25][26][27].

2.3. Conditional Transcriptional Regulators of TERT

There are some regulators, such as transcription factors E2F and specificity protein 1 (Sp1), upstream stimulatory factors (USF1/2), and tumor suppressor p73, which act as both repressors and activators of TERT expression depending on the condition. E2F acts as a TERT repressor in cancer cells; however, the condition is reversed in normal cells where it activates the expression of TERT. This transcription factor controls TERT regulation by binding to the GC box region on the promoter [28][29]. USF1/2 on the other hand acts as a repressor in normal cells and activator in cancer cells. This is achieved by E box binding on the promoter [30][31].

3. Post Transcriptional Regulation of TERT

TERT Regulation by microRNAs

The mechanisms associated with miRNA biogenesis and its influence on the hTERT gene have made substantial progress as evidenced by recently published studies. It has been reported that miRNAs can post-transcriptionally alter hTERT transcripts directly or indirectly [13][32]. MiRNAs can directly bind to conserved hTERT complementary sites located in the 3′-untranslated region (3′UTR) to restrict hTERT expression by negatively regulating their translation [33][34][35]. Specifically, expression of specific miRNAs have been shown to exert changes in tumor cell proliferation, cell cycle control, apoptosis, metastatic invasion, and protein expression levels [36][37]. Each miRNA has the potential to mediate the expression of their target genes. miR-1182 and miR-491-5p are two miRNAs that directly target the transcript of hTERT [38][39]. These interactions have been confirmed via luciferase assay. Further, it has been elucidated that miR-491-5p is involved in the regulation of the PI3K/AKT signaling pathway. Therefore, together these epigenetic gene regulators influence hTERT gene expression in cancers. In contrast, miRNAs may also indirectly target the transcription factors involved in hTERT regulation [13]; however, the precise molecular mechanisms that underlie post-transcriptional repression are still unclear.

4. Post Translational Regulation of TERT

Post-translational modifications of hTERT could modify protein stability, subcellular localization, and ultimately, enzyme activity [36]. To date, studies have identified that post-translational regulation of hTERT mainly involve phosphorylation and ubiquitination by kinases and ligases respectively [4][36][40]. Both phosphorylation and ubiquitination give rise to prominent effects by positively and negatively regulating hTERT activity [41].

In phosphorylation, kinases such as protein phosphatase 2A (PP2A) interact with c-Abl tyrosine kinase protein, leading to a threefold reduction of telomerase activity by dephosphorylation [36][42][43]. On the contrary, protein kinase B (an AKT kinase) increases telomerase activity through TERT phosphorylation-dependent activation of the PI3K/Akt/mTOR pathway [42][43]. Similar to protein kinase C, they phosphorylate hTERT by PKC isoenzymes α, β, δ, ε, and ζ to enhance telomerase activity, which is increased along with nuclear accumulation of hTERT [33][40][43][44][45]. In addition, kinases including kinase interacting protein (KIP), c-jun, and mitogen activated protein kinase (MAPK) also regulate post-translational modifications of hTERT. KIP regulation involves interactions with the upstream kinase domain of DNA–PKcs to improve telomerase activity in human cells, while, MAPK upregulate hTERT in a serum and pH-dependent manner within the hypoxic environment of solid tumors [5][46].

5. TERT Dysregulation in Leukemias

Studies on the various forms of leukemia have disclosed the dysregulation of TERT gravely affects the prognosis of the disease and is known to exert its mechanism of action via a plethora of modifications including epigenetics, mutations, amplifications, structural variants, and influences on oncogenes. The prevalence of TERT dysregulation remains to be determined in each subtype of leukemia and is also highly dependent on the population and recruitment criteria of each study. An early study has indicated that it affects approximately half of AML (53.3%) patients [47], while another report indicated that TERT dysregulation is present in all acute promyelocytic leukemia (APL, AML-M3) patients in their cohort [48]. Other studies have shown that hTERT dysregulation was only observed in limited cases of relapsed childhood ALL [49], while a study in Saudi Arabia disclosed that hTERT mutations are not linked to predisposition to childhood acute leukemia [50]. In terms of relevance in disease pathogenesis, studies have shown that in adult T-cell leukemia/lymphoma (ATLL), the activation of telomerase is required for the disease development and progression, while in AML and CML it is only required for maintenance and not initiation [51][52][53].

5.1. Chronic Myeloid Leukemia (CML)

Mechanism of TERT dysregulation was reported to occur via TERT promoter methylation. However, contrary to canonical research, DNA methylation would increase TERT activity, as methylation occurs on the genomic region bordering the TERT promoter. This results in the inaccessibility of repressor on this site, which is proximal to the TERT promoter, thereby increasing the affinity of TERT promoter binding of crucial activators leading to TERT hyper-expression (Figure 1A).

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Figure 1. (A) Epigenetic regulation of TERT via promoter border region methylation. (B) Loci amplification of TERT gene resulting in an increase in copy number.
Dysregulation of TERT also occur via gene amplification, which results in an increase in gene copy number (GCP). This phenomenon translates to increased gene expression levels due to relatively higher abundance of mRNA resulting from amplification (Figure 1B). It was observed that TERT catalytic components were amplified in patients with CML. Interestingly, TERC amplification does not correlate with resistance towards imatinib mesylate, although the copy number was calculated to be above 3 [54].
The CML fusion oncogene BCR-ABL was also found to contribute to the overall activity of TERT in aiding disease progression.
TERT was targeted indirectly through upstream factors crucial for TERT activation via inhibition of kinase activity. Imatinib mesylate (IM) is currently one of the major drugs used in CML treatment. However, treatment of CML using IM was found to potentiate CML towards leukemogenesis as it was reported that it enhances expression of hTERT via phosphorylation of STAT5 [55] (Figure 2).
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Figure 2. BCR-ABL control of TERT activity and expression generally targeted via Imatinib Mesylate or Tyrosine Kinase Inhibitor treatment.

5.2. Chronic Lymphoid Leukemia (CLL)

The mechanism of dysregulation of TERT in CLL is still largely unexplored. However, correlation studies report that telomeric length serves as an initial prognostic marker in CLL disease progression [56]. This was also associated with telomerase/telomere associated proteins expression, which also contribute as markers in the diagnosis of CLL onset. Research showed that significant decrease in telomeric length was observed in chromosomes 13p, 12, 11p, and 17p in which hypomethylation was also present. These aberrations were significant in CLL patients as compared to normal controls. Upregulation of telomerase/telomere-associated proteins was also observed in patients at early disease onset [57]. As in the case of most leukemia, TERT activation occurs via STAT5 mediated binding and its phosphorylation state [58][59][60]. This mechanism, although not studied extensively in CLL, may be a contributing mechanism as to how CLL progress in addition to the upregulated telomerase/telomere-associated proteins and telomeric length dysregulation.

Furthermore, in terms of DNA methylation status it was found that methylation of TERT promoter was crucial in different stages of leukemia development as it confers different functional advantages.

Dysregulation of TERT in CLL was also observed via single nucleotide polymorphisms (SNPs). Different SNPS led to different potential in TERT induced self-renewal [61].

Additionally, variation within the TERT and TERT C gene also contributed to an increase in telomeric ends. It was found that TERTC rs10936599 SNP with C allele had a significant association with CLL development as high allele frequency was observed in CLL patients.

Chromosomal aberrations were also found to contribute to TERT dysregulation in CLL. This includes the TERT/CLPTM1L locus in chromosome 5p15 and t(5,14) translocation, which resulted in the fusion of TERT to the IGH gene [62]. The IGH locus, which contains strong promoters, may have enhanced TERT activation as a significant increase in TERT expression was observed in CLL harboring this translocation [63]. Besides that, it was also found that deletion on chromosome 13 at locus q14 (13q14del) also contributed to better prognosis in patients. This locus contains the coding sequence for miR-15a/16-1 cluster which target TERT suppressor p53 [64][65]. The mechanism is illustrated in Figure 3.
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Figure 3. Control of TERT activity and expression occurring in CLL. (A) Promoter methylation status; (B) chromosomal deletion containing loci encoding for transcription factor suppressors; (C) chromosomal aberrations resulting in fusion of critical cis-regulatory elements with TERT coding sequence.

5.3. TERT Dysregulation and Clinical Implications in Acute Leukemias

Acute leukemia refers to an aggressive form of leukemia that typically progresses rapidly over a short period of time. It can be further subdivided into acute myeloid (AML) and acute lymphoid leukemia (ALL) [66]. TERT dysregulation that has been identified as one of the contributors to the pathogenesis of leukemia and has been reported in both AML and ALL.

5.3.1. TERT Dysregulation and Clinical Implications in Acute Myeloid Leukemia

Epigenetic regulation of TERT has been the focus of many studies as it is believed to aid in the malignant transformation of cells [32]. Hypermethylation of the TERT promoter results in TERT transcription activation that subsequently leads to higher telomerase activity [67]. According to a study by Zhao et al. (2016), TERT proximal promoter and a partial exon 1 (TERTpro/Ex1) region exhibits CpG site hypermethylation in AML cell lines and primary blasts [68]. This distinct methylation profile could serve as a prognostic factor in AML as it is associated with shorter overall survival and drug resistance. Apart from the above regulation, TERT is also regulated by oncogenic signaling FLT3-ITD (FMS-Like Tyrosine Kinase 3 Internal Tandem Duplication). FLT3, a type of receptor tyrosine kinase is often mutated in AML with internal tandem duplications within the juxtamembrane domain. Compelling evidence has implicated the role of FLT3-ITD mutation in leukemogenesis especially in the case of AML [69]. Recently, it has come to light that FLT3-ITD mutation could induce the expression of TERT, resulting in increased telomerase activity that contributes to AML pathogenesis [70]. Another method of telomeric elongation identified in promyelocytic leukemia (PML) (a form of AML) is alternative lengthening of telomeres (ALT) [71].

Conventional chemotherapy is one of the therapeutic approaches used to treat AML patients, whereby it is common that a combination of chemotherapeutic drugs is used. Each of the chemotherapeutic drug aims to target and inhibit the cancer cells via various mechanisms. One of the mechanisms targeted by a commonly used drug for AML, 5-azacytidine (5-AZA) is DNA methylation. 5-AZA, a DNA methyltransferase inhibitor (DNMTI), has been shown to downregulate TERT expression and decrease telomerase activity in AML patient samples and cell lines [72].

TERT-targeted immunotherapy has also become the subject of many cancer therapeutic studies. A study by Sandri et al. (2017) demonstrated that TERT865-873-specific, TCR-engineered T-cell lymphocytes were able to halt AML progression in vivo [73]. The main idea behind this therapy, known as adoptive T-cell therapy (ACT), is to increase the affinity and specificity of T-cell receptor (TCR) of T cells to tumor associated antigen (TAA). It is rather interesting to note that TERT865-873-specific, TCR-engineered T-cell lymphocytes were able to distinguish between AML blasts and peripheral blood mononuclear cells (PBMC), indicating its high cell recognition specificity.

5.3.2. TERT Dysregulation and Clinical Implications in Acute Lymphoblastic Leukemia

TERT-targeted therapies are quickly gaining popularity as a therapeutic option due to the role of TERT as a universal tumor associated antigen (TAA). BIBR1532, a small biological molecule specific for telomerase inhibition, has been studied by Bashash et al. (2017) for its application in pre-B ALL [74]. BIBR1532 was able to suppress TERT expression and telomerase activity in vitro in a dose-dependent manner. In addition, BIBR1532 suppressed the expression of c-Myc that acts as a transcriptional activator of TERT. Doxorubicin, a commonly used chemotherapeutic drug, was found to exert the same inhibitory action as BIBR1532 on TERT and c-Myc. This study also reported that the combination of doxorubicin together with BIBR1532 showed a greater inhibition of TERT and c-Myc transcription as compared to its individual counterparts. Thus, this combination therapy can be an effective therapeutic approach for pre-B ALL.

6. Conclusions and Future Perspectives

In summary, many preclinical and clinical studies on leukemia have concluded that TERT plays a pivotal role in disease progression and deteriorating prognosis of patients. Studies aimed at determining the factors influencing TERT expression during leukemogenesis and the stage where this gene is upregulated has contributed immensely to the understanding of the fundamental roles of TERT in various forms of leukemias. Additionally, it has also been proven that different mechanisms are involved in the expression of this gene including transcriptional, genetic, and epigenetic regulators. These mechanisms of activation and dysregulation of TERT in onco-hematological diseases are progressively being elucidated and in recent years, researchers have deciphered many novel variants, modifications, pathways, and mediators leading to its overexpression. The latest findings have identified mutations in the hTERT gene, methylation of its promoter, and microRNAs targeting its transcript as leading areas of fundamental studies and highly promising for therapeutic development. Indeed, progress in clinical trials have determined that chemical drugs and biomolecules targeting various regulators of TERT have immense potential in controlling the proliferation and metastasis of leukemias, primarily via arrest of cellular division. Noteworthy, in recent years there have been renewed interests in targeting hTERT as a therapeutic strategy due to developments in several areas including immunotherapies, drug discovery, gene therapy, and radiotherapy. Combination of agents specific to TERT and other anti-cancer drugs have also been widely explored with many studies indicating synergistic effects, reduced dose requirements and decreased side effects. The survival outcomes of leukemic patients have improved in recent years, and it is expected that therapies targeting TERT and their combinations with other anti-cancer agents could further improve the prognosis of patients especially those with TERT-dependent leukemias.

This entry is adapted from the peer-reviewed paper 10.3390/genes12081188

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