3.3. Environmental and Epigenetic Contributing Factors
Environmental contributors to obesity are complex and deep-rooted in modern society. These include a recent shift to plentiful, highly palatable processed food in combination with the adoption of a sedentary lifestyle and a disruption in normal circadian rhythms [
2]. Furthermore, it has been revealed that chronic stress plays a major role in the development of obesity and its complications [
85,
86]. Chronic hypersecretion of stress mediators, such as glucocorticoids, may result in insulin and leptin hypersecretion, contributing to insulin and leptin resistance, along with dysregulation of appetite and food intake by inducing alterations in the reward system, finally leading to obesity [
86]. Also, overexpression of 11β-hydroxysteroid dehydrogenase type 1 (11β-HSD1) resulting in increased conversion to active cortisol, has been associated with central obesity because of increased activity in the adipose tissue of obese adult females [
48]. Importantly, the offspring of obese mothers display a higher baseline cortisol, resulting in a dysregulated stress response and predisposition to metabolic dysfunction [
48].
Epigenetic contribution to obesity has attracted great interest, as it helps understand the interaction between genes and environment. There are rapid, dynamic and reversible or long-term less reversible adaptive alterations of genome activity without concurrent changes in the DNA sequence, following environmental stimuli [
87]. Environmental factors, including nutrition, physical activity, lifestyle, sleep habits, chronic stress, pollutants and so forth, can trigger the onset of obesity by epigenetically modifying genes involved in multiple biological processes in metabolism and immunity [
48]. Epigenetic changes may occur during fetal life, early childhood, and adolescence and to a lesser degree, in adulthood, and encompass DNA methylation, glycosylation, myristoylation, post-translational histone modifications, as well as nc RNAs orchestrating a variety of cellular processes, including gene expression [
88].
Significantly, maternal under- or over-nutrition, as well as maternal insulin resistance and weight gain during pregnancy are markedly associated with offspring obesity [
2]. Even though the existing evidence mainly attributes these effects to DNA methylation and histone modifications, recent animal findings unveil miRNA alterations caused by an unfavorable intrauterine environment as potential contributors to offspring obesity. For instance, in rats, maternal protein restriction led to the programmed increase of imprinted miR-483 in offspring epididymal WAT (eWAT). This resulted in decreased expression of growth differentiation factor 3 (GDF-3) and subsequent inhibition of adipogenesis and ectopic fat accumulation [
89]. Interestingly, in AT from low birthweight humans miR-483 was increased, with a concomitant decrease in GDF-3 [
89]. On the other hand, maternal HFD induced a programmed increase in miR-126, resulting in reduced insulin receptor substrate-1 (IRS-1) in eWAT of male offspring [
89]. Furthermore, apart from maternal contribution, there is mounting evidence for the intergenerational transmission of paternal metabolic disease risk via EVs. Environmental adverse factors are imprinted in the specific EVs cargo and transferred to sperm [
90]. Intriguingly, sperm from HFD-fed males contains miRNAs that cause offspring obesity when transported into embryos [
88]. Below, we focus on the special contribution of nc RNAs (miRNAs and lncRNAs), identified within exosomes or directly in blood circulation, in obesity development and maintenance.
Exosomal miRNAs in obesity. Obesity has been associated with increased circulating EVs, including exosomes [
55]. The pro- or anti-inflammatory properties of exosomes and their ability to act as mediators of communication among the liver, AT, skeletal muscles and the immune system, may account for their roles in obesity and obesity-associated inflammation [
8]. These inflammation-related properties of exosomes may be accomplished via their unique cargos, especially miRNAs, as demonstrated by the reduced metabolic effects of miRNA-depleted exosomes [
58]. A growing body of evidence implicates exosomal miRNAs, such as miR-155 and miR-27a, in the crosstalk between adipocytes and ATMs, which is an important determinant in obesity development [
91]. More specifically, miR-155 is increased in adipocyte-derived exosomes in obese mice as compared to lean mice and it can stimulate proinflammatory M1 macrophage polarization and impair BAT activity by inhibiting C/EBP [
58]. MiR-27a displays similar activity in macrophages and represses adipocyte differentiation, while increased serum levels of this miRNA are related to obesity in children [
91]. Adipose-derived exosomal miRNAs, whose profile is altered in obese female teenagers, alter Wnt/β-catenin and TGF-β signaling, which regulate adipogenesis and inflammatory responses [
60]. Moreover, the dysregulated profile of circulating exosomal miRNAs is modified one year after gastric bypass surgery in adults [
91]. Lastly, it has been proposed that microbes excrete miRNA-containing vesicles, which could potentially contribute to the metabolic impact of gut microbiota dysbiosis on obesity and related complications [
92].
Circulating miRNAs in child and adolescent obesity. Up to now, most studies have been conducted by identifying circulating miRNAs in blood samples rather than exosomal or even adipose-derived exosomal miRNAs and have been mostly focused in adult obesity, with a general scarcity of data regarding miRNA involvement in childhood obesity [
93]. However, some recent studies have evaluated circulating miRNAs in blood samples in several childhood disorders, such as diabetes and obesity [
94,
95,
96]. Obese children overexpressed four particular circulating miRNAs (miR-222, miR-142-3, 140-5p and miR-143) [
93]. These findings regarding miR-222, miR-142-3 and 140-5p are in accordance with findings in adults, in whom increased levels of these miRNAs have been correlated with an increased BMI and severe obesity [
61]. Another study evaluated a complete miRNA panel in prepubertal children with obesity and found that various miRNAs were deregulated and related to BMI, adipose tissue percentage of body weight and other parameters of metabolic dysfunction [
94]. One of them, miR-122, which was increased, correlated positively with dyslipidemia, NAFLD and insulin resistance in children [
95], while several genes targeted by miR-122 have been associated with insulin resistance and skeletal muscle response to insulin. In adult NAFLD, miR-122 was significantly decreased in the liver but elevated in the circulation. It has been speculated that miR-122 is normally secreted by the liver to regulate hepatic function and cholesterol production, however, in obesity it is largely secreted by adipose tissue, perhaps in an attempt to maintain normal liver function [
91]. Furthermore, obese rodents and humans, as well as children with NAFLD, have increased levels of miR-34a in vWAT, while miR-34a has been identified in adipose-derived exosomes and has been shown to inhibit M2 macrophage polarization promoting obesity-associated inflammation [
93].
In a study by Thompson et al., obese children displayed a prominent increase in circulating miR-199a compared to lean controls [
97]. Functionally, miR-199a is implicated in preadipocyte proliferation and differentiation and insulin signaling. In the same study, miR-21, miR-27b, miR-29a, miR-150 and miR-223 correlated significantly with BMI, especially miR-29a [
97], already known to be associated with obesity and diabetes. miR-29 knockout mice were protected from diet-induced obesity and insulin resistance. Furthermore, in obese preschoolers three circulating miRNAs, miR-200c-3p, miR-190a and miR-95, correlated with insulin resistance [
95]. Moreover, hsa-miR-125a-5p, hsa-miR-342-3p and hsa-miR-365b-3p could predict endothelial dysfunction in obese children aged 5–10 years [
96]. Another miRNA shown to be correlated with obesity was miR-150; this miRNA mediates transformation between BAT and WAT. miR-150 knockout mice displayed body weight loss associated with hyperleptinemia and enhanced insulin sensitivity [
98]. While miR-150 levels were increased in obese children, they were decreased in obese adults with diabetes mellitus compared to lean controls, suggesting differences in the profile of circulating miRNAs between children and adults that should be taken into account when evaluating potential biomarkers [
97].
Exosomal lncRNAs in obesity. Most studies investigating exosomal lncRNAs have mainly evaluated the function of cancer cell secreted exosomal lncRNAs. Nevertheless, one study demonstrated that adipose tissue secretes exosomes containing the lncRNA HOTAIR, that subsequently communicate with intestinal cells and promote their proliferation, thus linking sedentary lifestyle and obesity with colorectal cancer [
27]. Another study exploring the exosome content of adipose-derived stem cells (ASC) from lean and obese individuals, demonstrated that growth-arrest specific 5 (GAS5), large intergenic ncRNA (lincRNA)-VLDLR and metastasis associated lung adenocarcinoma transcript 1 (MALAT1) are increased in exosomes. Specifically, exosomal lincRNA-VLDLR secretion is increased in the omental fat of ASC derived from obese individuals, while exosomal MALAT1 expression is increased in subcutaneous ASC from lean individuals [
99].
Circulating lncRNAs in obesity. There is mounting evidence that lncRNAs could provide insight into obesity-related gene regulation. In a recent study, 249 lncRNAs and 392 mRNAs were abnormally expressed in obese adults compared to controls with a normal BMI [
100]. In particular, lncRNA-p5549, lncRNAp21015 and lncRNA-p19461 were comparatively decreased in obese subjects and significantly correlated with BMI, waist circumference, and waist-to-hip ratio, but not with obesity-related inflammatory biomarkers [
100]. After 12 weeks of dietary intervention and body weight loss, circulating levels of lncRNA-p19461 increased and correlated negatively with insulin resistance [
100]. Finally, the evaluation of lncRNA-mRNA interaction networks revealed that the Toll-like receptor (TLR) signaling pathway, a well-established pro-inflammatory pathway, and fatty acid metabolism had a strong interaction, probably influencing obesity risk [
100].
Apart from genetic predisposition to obesity associated with functional polymorphisms affecting LEP and LEPR gene expression, epigenetic alterations in the transcriptional LEP gene regulation could lead to obesity by decreasing leptin secretion by adipocytes, suggesting that individuals with obesity and low leptin levels could remain sensitive to leptin and benefit from leptin therapy. Accordingly, Dallner et al. identified lncOb, that appears to increase LEP gene transcription by stabilizing the promoter complex loop; conversely, lncOb expression defects led to a form of obesity characterized by low leptin levels, that responded to leptin therapy [
101]. In line with this finding, single-nucleotide polymorphisms (SNPs) in the lncOb region were identified in individuals with obesity and low leptin levels [
102]. In another study, Lo et al. identified a lncRNA ~20kb upstream the LEP gene, which they named lnc-Leptin, whose expression was elevated in obesity, decreased by fasting, and induced by insulin, but which displayed a positive correlation with leptin expression in a spectrum of pathophysiological conditions, suggesting that this lncRNA acts probably as an enhancer-lncRNA [
103].
Despite the fact that numerous lncRNAs have been identified as key regulators of adipocyte biology, the understanding of their role in childhood and adolescent obesity remains limited. A recent genome-wide association study (GWAS) analysis revealed an SNP in the lncRNA rhabdomyosarcoma 2-associated transcript (RMST) in children with severe obesity [
104]. Furthermore, 1268 lncRNAs were shown to be differentially expressed in the adipose tissue of obese and non-obese children (531 increased and 737 decreased), as well as 1085 mRNAs (618 increased and 467 decreased) [
105]. Gene ontology (GO) and pathway analysis of related genes demonstrated that 10 lncRNAs play a role in multiple biological pathways, including those implicated in immune and inflammatory reactions, fatty acid biosynthesis, osteoclast differentiation, and the AMPK signaling pathway [
105]. Using quantitative Reverse Transcription polymerase chain reaction (qRT-PCR), lncRNA RP11-20G13.3, LINC00968, and AC011891.5 had comparatively increased expression levels, while expression of GYG2P1, RP11-529H2.1 and oligodendrocyte maturation–associated long intergenic nc RNA (OLMALINC) was comparatively decreased in children with obesity [
105]. Expression levels of lncRNA RP11-20G13.3 demonstrated a positive correlation with BMI, waist circumference, waist-to-hip ratio, low-density lipoprotein (LDL) cholesterol, fasting insulin, high-sensitivity C-reactive protein (hsCRP) and leptin, and suppression of preadipocyte to adipocyte differentiation [
105]. On the contrary, lncRNA GYG2P1 expression levels displayed a negative correlation with parameters of metabolic health, such as BMI, waist circumference, fasting insulin and triglycerides. These findings suggest that these two lncRNAs could be pivotal in the pathogenesis of childhood obesity [
105].
In a study by Chen et al., lncRNA HLA complex P5 (HCP5) and LINC00839 were considerably increased in obese children compared to controls [
106]. HCP5 polymorphisms have been associated with autoimmune disorders, leading to the hypothesis that HCP5-related disruption of immune response can contribute to childhood obesity; HCP5 functions as a competing endogenous RNA (ceRNA) binding to miR17-5p and increasing Ras-related protein R-Ras (RRAS) protein expression in the MAPK signaling pathway, which regulates adipocyte carbohydrate metabolism, thus, promoting childhood obesity development [
106]. Respectively, HCP5 can act as a ceRNA binding to miR-27a/b to determine differentiation of adipocytes in childhood obesity, through Nemo-Like Kinase (NLK) in MAPK and Forkhead box O (FoxO) signaling pathways [
106].
3.4. Clinical Use of Exosomes and Therapeutic Aspects
Exosomes represent a novel promising class of microvesicles with potential applications as biomarkers for various diseases and as therapeutic biomolecule carriers [
11]. The ability of different cell types to display unique exosomal cargo, as well as the presence of exosomes in multiple biological fluids, can be exploited in the development of accurate non-invasive biomarkers for various conditions. For example, urinary exosomal miR-424 and miR-218 have been evaluated as biomarkers for Type 1 Diabetes Mellitus (T1DM) in children [
107]. Compared to traditional biomarkers, exosomes are less complicated than the overall bodily fluids and have high content stability, facilitating long-term storage [
12]. In addition, circulating miRNAs may be detected in the serum earlier during disease progression than many traditionally used protein biomarkers [
97]. Obesity-associated circulating miRNAs, owing to their ability to reveal dynamically the current state of their originating cells, as well as to their efficient protection inside exosomes, constitute promising non-invasive biomarkers of obesity and related metabolic complications.
The establishment of circulating miRNAs as biomarkers of childhood obesity could provide a tool for evaluating the degree of obesity and risk factors for metabolic syndrome and T2DM prediction, which is of great importance for personalizing medical practice and preventing the future consequences of childhood obesity and associated comorbidities. For example, it has been suggested that miR-122 could potentially apply as a future biomarker for evaluating disease severity and monitoring disease progression in pediatric NAFLD [
108]. Such an application could limit the need for invasive liver biopsies, usually required to diagnose this disease. Furthermore, circulating miRNAs could be used to monitor body weight-loss attempts, such as dietary restriction, physical programs and bariatric operations, all of which have been associated with up- or down-regulation of specific miRNAs. Lately, lncRNAs have also been attracting interest as prospective biomarkers for various disorders, especially cancer [
109].
Regarding the use of exosomes as therapeutic biomaterials, naturally derived exosomes may bear therapeutic properties proportionate to the ones of their cell of origin or could be used as active biomolecule carriers [
110], with potential applications in cancer, cardiovascular, neurologic, and autoimmune diseases. For instance, in T1DM, stem-cell derived exosomes display a protective action on beta-cell autoimmune destruction, while transplanted bone marrow exosomal miR-106b and miR-222 have been associated with enhanced b-cell proliferation and improvement of hyperglycemia [
111]. Exosomes are coming to light as therapeutic delivery systems for miRNA mimetics or anti-miRNA oligonucleotides, because of their comparably high biocompatibility and low immunogenicity, as well as their increased capacity to carry nucleic acids and to target specific cells through their surface proteins. Various methods can be used to load miRNAs into exosomes, such as electroporation, active packaging by using proteins or conserved sequences of exosome enriched RNAs (eeRNAs) and transfection of isolated exosomes or of the parental cells to produce “hybrid” exosomes [
112]. The above information suggests that modifying exosomal miRNA cargo could provide various health-related benefits and upgrade traditional therapeutic approaches. However, more studies are required to assess the feasibility of these applications and great attention should be paid regarding their possible adverse effects, as exosomes mediate various physiological procedures, that could possibly be disrupted if exosome cargo and function were altered [
110]. Moreover, massive production of synthetic exosome analogues could provide a promising new method for drug delivery.
During the last decade, miRNAs have become promising therapeutic agents for many disorders such as metabolic syndrome, neurological and autoimmune disorders, and cancer [
4,
18]. More specifically, in childhood obesity, the attractive perspective of ameliorating insulin resistance and obesity-related inflammation, and of promoting browning of WAT could be accomplished by the activation or blockade of key circulating miRNAs. Recent studies have identified distinct circulating miRNA profile in non-syndromic obesity and genetic obesity types, such as Prader-Willi syndrome, associated with distinct molecular pathogenesis [
113]. Further investigation could reveal specific miRNAs for therapeutic targeting of these rare disorders. Intriguingly, recently a group of miRNAs has been patented for the treatment of diseases associated with primary ciliopathies, including the genetic obesity syndrome Bardet-Biedl [
114].
Another promising therapeutic strategy would be to target exosomal lncRNAs. This perspective has been evaluated mainly in cancer; however, obesity could be next. Pharmacological compounds could target lncRNAs that regulate white adipocyte differentiation, exploiting the recently uncovered structure and function of many lncRNAs. Alternative strategies could include stimulation of brown adipocytes by lncRNAs that possess such properties, such as Blnc1, or regulation of combined lncRNAs-miRNAs that interact during adipocyte differentiation, such as NEAT1 and miR-140 [
72]. The establishment of lncRNAs as therapeutic targets remains a remote but promising perspective at this time.