The exponential expansion of genomic data coupled with the lack of appropriate clinical categorization of the variants is posing a major challenge to conventional medications for many common and rare diseases. To narrow this gap and achieve the goals of personalized medicine, a collaborative effort should be made to characterize the genomic variants functionally and clinically with a massive global genomic sequencing of “healthy” subjects from several ethnicities. Familial-based clustered diseases with homogenous genetic backgrounds are amongst the most beneficial tools to help address this challenge
Gene | Significant Mutation * | Patients | Population | Sample Size | Treatment and Daily Dose | Clinical Findings | Author, Year (References) |
---|---|---|---|---|---|---|---|
LDLR | FH1 (C206G) & FH2 (G408A) |
Het-FH | Afrikaners | 20 | Simvastatin 40 mg | TC reduction is higher in patients with FH2 than FH1 | Jeenah et al., 1993 [19] |
LDLR | C660X, D147H, & 652delGGT | Het-FH | Israeli | 64 | Fluvastatin 40 mg | Reduction of LDL-C, apoA, and elevation of HDL-C depend variously on LDLR mutations | Leitersdorf et al., 1993 [23] |
APOE | E2,3, & 4 alleles | Het-FH | Canadian | 49 | Lovastatin 80 mg | Statin sensitive is higher in men with E4 than E3 or E2 or women with any APOE phenotype | Carmena et al., 1993 [35] |
LDLR | FHTONAMI-1 (Del exon15) &FHKANAZAWA (C665T) | Het-FH | Japanese | 12 | Pravastatin & cholestyramine | LDL-C reduction is higher in patients with FHKANAZAWA than FH1 FHTONAMI-1 | Kajinami et al., 1998 [20] |
LDLR | W66G, C646Y, & deletion>15 kb | Het-FH | Canadian | 63 | Simvastatin 20 mg | LDL-C reduction is higher in patients with C646Y & deletion > 15 kb than W66G | Couture et al., 1998 [21] |
LDLR | Severe and mild LDLR | Het-FH | British | 42 | Simvastatin + bile acid sequestrant | LDL-C is higher in patients with severe than mild mutation | Sun et al., (1998) [33] |
LDLR | Null and defective LDLR | Het-FH | British | 109 | Simvastatin | LDL-C reduction is higher in patients with defective than null mutation | Heath et al., (1999) [31] |
LDLR | AvaII (rs5925T>C), HincII (rs688C>T), & PvuII (rs2569542A>G) | Het-FH | Brazilian | 55 | Fluvastatin 40–80 mg | LDL-C, TC, & ApoB reduction is higher in patients with AvaII & PvuII than HincII | Salazar et al., 2000 [22] |
LDLR | Null and defective LDLR | FH | Spanish | 55 | Simvastatin 20 mg | Low HDL-C & poor statin response are higher in patients with defective than null mutations | Chaves et al., (2001) [32] |
APOE | E4 allele | Het-FH | British | 19 | Atorvastatin 10 mg + bile acid sequestrant | Poor statins response is high in patients with E4 phenotype | O’Neill et al., 2001 [36] |
LDLR | Null and defective LDLR | Het-FH | Canadian | 63 | Atorvastatin 20 mg | LDL-C reduction is higher in patients with null than defective mutation | Vohl et al., (2002) [37] |
LDLR | G1775A, G1646A, & C858A |
Het-FH | Greek | 49 | Atorvastatin 20 mg | LDL-C & ApoB reduction is higher in patients with G1775A than G1646A & C858A | Miltiadous et al., 2005 [24] |
MTP | c.493 GT | Het-FH | Spanish | 222 | Atorvastatin 20 mg | High reduction of TG in men and low reduction of VLDL & TG in women with c.493 GT allele | García-Garc ía et al., 2005 [38] |
CETP | −867 and Ex14/I405V | Het-FH | Israeli | 76 | Fluvastatin 40 mg | LDL-C reduction is high among CETP & MDR1 mutants | Bercovich et al., 2006 [39] |
MDR1 | c.(G2677T) and c.(C3435T) | ||||||
LDLR | Null and defective LDLR | Het-FH | Spanish | 811 | Simvastatin or atorvastatin 80 mg ± bile acid sequestrant | PCVD & TC is higher in patients with null than defective mutations | Alonso et al., 2008 [40] |
ABCG2 | rs2231142 | FH | Chinese | 386 | Rosuvastatin 10 mg | High LDL-C reduction among patients with AA genotype | Hu et al., 2010 [41] |
LDLR | Null and defective LDLR | FH | Spanish | 387 | Maximum statin doses ** + ezetimibe 10 mg | Poor LLT response & high PCVD in patients with null than defective mutations | Mata et al. (2011) [42] |
LDLR | W556R | Twins with Hom-FH and parents with Het-FH (one family) | Turkish | 4 | Simvastatin 40 mg + ezetimibe 10 mg or LDL apheresi | Hom-FH have a low LDL-C reduction and high statin resistance, but Het-FH respond to statin with 60% LDL-C reduction | Schaefer et al., 2012 [43] |
CYP3A4 | rs2740574 | FH | Chilean | 142 | Atorvastatin 10 mg | High statin sensitivity among patients with CYP3A4 mutations | Rosales et al., 2012 [44] |
ANRIL | rs1333049 | FH with CVD | Pakistani | 611 | Atorvastatin 10, 20 or 40 mg | High LDL-C, TC, & TG reduction in patients with CC genotype | Ahmed et al., 2013 [45] |
LDLR | Null (W66G) and defective (C646Y) LDLR | Het-FH | Brazilian | 156 | Atorvastatin 10, 20 or 40 mg | LDL-C reduction is more in patients with defective than with null mutation | Santos et al., 2014 [30] |
POR | rs1057868 | FH | Greek | 105 | Atorvastatin 10, 20 and 40 mg | High LDL-C & TC reduction in patients with 1/1 genotype | Drogari et al., 2014 [46] |
MYLIP | rs9370867 | Het-FH | Brazilian | 156 | Atorvastatin 10–80 mg ± ezetimibe 10 mg | High LDL-C reduction in patients with AA genotype | Santos et al., 2014 [47] |
PSCK9 | E32K | Hom-FH | Japanese | 1055 | Atorvastatin 80 mg & ezetimibe 10 mg | PSCK9 gain-of-function variants significantly worsen LDLR phenotype and decrease LDL-C reduction | Mabuchi, et al., 2014 [48] |
LDLR | Double allele | ||||||
LDLR | Null and defective LDLR | FH | Spanish | 4132 | Maximum statin doses ** + ezetimibe 10 mg | Poor LLT response & CVD events are higher in null than in defective mutation | Perez de Isla et al., 2016 [14] |
LDLR | p.(Cys155Gly) | Hom-FH | Belgian | 8 | Atorvastatin 80 mg, ezetimibe 10 mg, cholestyramine | LLT efficacy is attenuated in patients with nonsense LDLR mutations | Sanna et al., 2016 [34] |
HMGCR | rs3846662 | Het-FH | French Canadian | 106 | Statin + LLTΩ | Poor statin response among HMGCR mutants | Leduc et al., 2016 [49] |
LDLR | W87G, C368Y, T726I, G2fsX214, D47N, N97H, E101K, C216fsX, L582P, C667Y, & LDLR-17-18 del | Het-FH | American and Canadian | 139 | Atorvastatin 40/80 mg, rosuvastatin 20/40 mg or simvastatin 40/80 mg, + Bococizumab 0.25, 1, 3, or 6 mg/kg |
Bococizumab effecacy is higher than statin in reducing LDL-C across LDLR & APOB variants | Fazio et al., 2018 [50] |
APOB | R3527Q | ||||||
LDLR | Het-LDLR mutation | FH | Spanish | 22 | Maximum statin doses ** ± ezetimibe 10 mg | LDL-C reduction is higher in patients with p.(Leu167del) mutation than LDLR | Bea et al., 2019 [51] |
APOE | p.(Leu167del) | ||||||
LDLR SLCO1B1 ABCB11 CYP3A5 |
rs28941776 c.(521T>C; SLCO1B1*5) & c.(388A>G; SLCO1B1*1B) rs2287622 CYP3A5*3 |
FH | Caucasian | 1 | Rosuvastatin 40 mg & ezetimibe 10 mg | Loss-of-function mutations enhance statin myotoxicity and delay its response | Dagli-Hernandez et al., 2021 [52] |
LDLR | c.(2027delG), p. (Gly676Alafs*33) | FH (2 families) | Saudi | 12 | Statin + ezetimibe | Clinical manifestations and poor LLT response depend on LDLR variants | Awan et al., 2021 [29] |