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Circulating Tumour Cell Enrichment Technologies: Comparison
Please note this is a comparison between Version 1 by Amelia Rushton and Version 2 by Bruce Ren.

Circulating tumour cells (CTCs) are the precursor cells for the formation of metastatic disease. With a simple blood draw, liquid biopsies enable the non-invasive sampling of CTCs from the blood, which have the potential to provide important insights into cancer detection and monitoring. Since gaining FDA approval in 2004, the CellSearch system has been used to determine the prognosis of patients with metastatic breast, prostate and colorectal cancers. This utilises the cell surface marker Epithelial Cell Adhesion Molecule (EpCAM), to enrich CTCs, and many other technologies have adopted this approach. More recently, the role of mesenchymal-like CTCs in metastasis formation has come to light. It has been suggested that these cells are more aggressive metastatic precursors than their epithelial counterparts; however, mesenchymal CTCs remain undetected by EpCAM-based enrichment methods. This has prompted the development of a variety of ‘label free’ enrichment technologies, which exploit the unique physical properties of CTCs (such as size and deformability) compared to other blood components.

  • circulating tumour cell (CTC)
  • cancer
  • metastasis
  • liquid biopsy

1. Background

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With a simple blood draw, liquid biopsies enable the non-invasive sampling of CTCs from the blood, which have the potential to provide important insights into cancer detection and monitoring. Since gaining FDA approval in 2004, the CellSearch system has been used to determine the prognosis of patients with metastatic breast, prostate and colorectal cancers. This utilises the cell surface marker Epithelial Cell Adhesion Molecule (EpCAM), to enrich CTCs, and many other technologies have adopted this approach. More recently, the role of mesenchymal-like CTCs in metastasis formation has come to light. It has been suggested that these cells are more aggressive metastatic precursors than their epithelial counterparts; however, mesenchymal CTCs remain undetected by EpCAM-based enrichment methods. This has prompted the development of a variety of ‘label free’ enrichment technologies, which exploit the unique physical properties of CTCs (such as size and deformability) compared to other blood components.

1. Introduction

2. Introduction

Circulating tumour cells (CTCs) are shed into the bloodstream from both primary and metastatic tumours and those that are able to survive in the circulation represent metastatic precursor cells [1]. CTCs are important biomarkers for disease and are a powerful tool to study tumour progression and evolution. They represent a rare and heterogeneous population of cells, typically accounting for ∼1 cells for every 10

Circulating tumour cells (CTCs) are shed into the bloodstream from both primary and metastatic tumours and those that are able to survive in the circulation represent metastatic precursor cells [1]. CTCs are important biomarkers for disease and are a powerful tool to study tumour progression and evolution. They represent a rare and heterogeneous population of cells, typically accounting for ∼1 cells for every 10

5

–10

6

peripheral blood mononuclear cells (PBMCs), so a key challenge for their clinical utility is the development of standardised isolation and characterisation technologies [2]. There are numerous technologies that have been developed to enrich CTCs from normal hematopoietic cells that rely on physical and biological properties of CTCs, including size, density, cellular charge and expression of cellular markers. The enrichment techniques (Table 1) can broadly be divided into immunocapture methods that differentiate cells based on epithelial cell surface marker expression, notably epithelial cell adhesion molecule (EpCAM) (Figure 1A), and those that differentiate based on distinct biophysical properties (Figure 1B,C). If CTC enrichment and characterisation is to be routinely used in the clinical setting, technologies must ideally meet several criteria: they must have high detection and recovery rates, with accurate throughput sample processing and enumeration capability. Further, they must be generally fully automated and easy to use, with little to no pre-processing of blood required. Finally, if they are to have wide clinical applicability, they must be able to detect heterogeneous cells from a wide range of different cancers.

Figure 1.

Summary of circulating tumour cell (CTC) enrichment technologies. (

A

) Immunocapture methods including immunomagnetic positive and negative enrichment methods, microfluidic immunocapture methods, nanomaterial immunocapture enhancement and their relevant technologies; (

B

) Biophysical property enrichment methods including membrane filtration, size-based microfluidics, density based and dielectrophoresis and associated technologies; (

C) Other methods including in vitro, combined and secondary isolation methods and associated technologies.

) Other methods including in vitro, combined and secondary isolation methods and associated technologies.

Table 1. CTC isolation technologies, grouped based on enrichment method. Capture efficiency, recovery rate and advantages and disadvantages of the technologies are also shown.

SubcategoryNameCapture Efficiency (%)Recovery Rate (%)AdvantagesDisadvantages
Immunomagnetic enrichment     
Immunomagnetic positive enrichmentCellSearch [3][4][5][6][7]42–90 Semi automated

Can process up to 8 samples at a time

In device staining

CTC enumeration via CellTracks Analyser

FDA approved
Recovery of EpCAM+ CTCs only

Only able to detect CTCs expressing high levels of EpCAM
 MACS [8][9]25–90 Cocktail of antibodies available to increase CTC capture

Able to process up to 15 mL blood

Easy elution of CTCs

Pro Separator can process up to 6 samples at once
Recovery of EpCAM+ CTCs only

Suggested the MACS system is better suited for tissue samples
 MagSweeper [10][11]60–70 Nonadherent plastic sleeves allow for multiple rounds of capture to increase capture efficiencyRecovery of EpCAM+ CTCs only
 Strep-tag [12][13]79–8670Easy release of CTCs by simple addition of d-biotin

Possibility to use a cocktail of antibodies to increase capture
Recovery of EpCAM+ CTCs only
 IMS [14]92 Leukocytes repelled so high purity recoveriesRecovery of EpCAM+ CTCs only

Not yet tested on patient samples
Immunomagnetic negative enrichmentEasySep [15][16]19–65 Recovery of heterogeneous population of CTCsExclusion of CTC-WBC clusters

Variable recovery rates

May inadvertantly remove CTCs
 RosetteSep [17]62.5 Recovery of heterogeneous population of CTCs

Cocktail of antibodies used to maximise depletion
Exclusion of CTC-WBC clusters,

May inadvertantly remove CTCs
Microfluidic immunocapture positive enrichmentCTC-Chip [18][19] >60Large surface area for CTC capture

High viability of recovered cells
Recovery of EpCAM+ CTCs only

Slow processing rate

Complex geometry of chip difficult to scale up

Geometry prevents passage of CTC clusters
 HB-chip [20]74.5–97 HB grooves increase CTC-antibody contact for increased cell captureRecovery of EpCAM+ CTCs only
 GEDI chip [21]80–90 Large surface area for CTC capture

Possibility to functionalise with alternative antibodies
May miss heterogeneity of CTCs
 HTMSU [22]>97 Quick processing

On-chip single-cell conductometric counting for enumeration
Recovery of EpCAM+ CTCs only
 Nanovelcro [23]70–95 4 generations developed for different clinical utilities

3rd and 4th generation chips adapted for easy CTC release
Recovery of EpCAM+ CTCs only
 Isoflux [4]74–9064–75Utilises microfluidic approach to increase EpCAM sensitivity

Up to 4 samples can be processed in parallel

Multiple kits including cocktails of antibodies to capture heterogeneity

IsoFlux Cytation Imager for sample scanning
 
Capture enhancement by nanomaterialsNP-HBCTC-Chip [24]79–97 Simple release of CTCs by addition of glutathione (GSH)

Chip surface can be functionalised with a cocktail of antibodies for enhanced capture efficiency
Recovery of EpCAM+ CTCs only

Very low throughput
 GO chip [25][26]67–10091–95Simple chip design

Large surface area for increased CTC capture
Recovery of EpCAM+ CTCs only
 SiNP [27]84–91 Large surface area for CTC captureRecovery of EpCAM+ CTCs only
Capture enhancement by nanomaterialsNanotube-CTC-chip [28]89–100 Preferential adherence negates need for EpCAM antibodies

Planar enrichment surface makes chip visualisation and imaging easy
Time taken for optimal CTC adherence to substrate is too long
Size based enrichment     
Membrane filtrationFMSA [29]90 Recovery of heterogeneous population of CTCs

Cheap and easy to produce

Quick processing time
Filter clogging highly likely
 ScreenCell [30] 74–91Recovery of heterogeneous population of CTCs

Cheap and easy to produce

Three different devices offered depending on downstream requirements

Quick processing time
Unevenly distributed or fused pores can reduce capture efficiency
 ISET [31][32] 83–100Recovery of heterogeneous population of CTCs

Cheap and easy to produce

Ability to process 12 samples in parallel
Slow processing time

Blood must be diluted 1:10 to prevent membrane clogging
 SB microfilter [33]78–83 Recovery of heterogeneous population of CTCs

Cheap and easy to produce

Quick processing time
Only 1 mL blood can be processed at a time due to device clogging
 FAST [34] 94–98Recovery of heterogeneous population of CTCs

Cheap and easy to produce

Quick processing time
 
MicrofluidicsParsortix [35]42–7054–69Recovery of heterogeneous population of CTCs

Ability to capture CTC clusters

Option for on-chip staining
Slow processing time

On-chip imaging difficult
 MCA [36]>9068–100Recovery of heterogeneous population of CTCs

Option for on-chip staining

Ability to process up to 4 samples in parallel
 
 ClearCell FX1 [37][38] 52–79Recovery of heterogeneous population of CTCs

Quick processing time

No channel clogging observed
 
 Vortex VTX-1 [39][40] 53.8–71.6Recovery of heterogeneous population of CTCs

Filters at channel inlet prevent channel clogging

Fully automated process

Quick processing time

Associated BioView for enumeration

Option to run in “high recovery” or “high purity” mode
 
 p-MOFF [41] 91.6–93.75Recovery of heterogeneous population of CTCs

Quick processing time

No channel clogging observed
RBC lysis and Ficoll density centrifugation required
Density basedOncoQuick [42][43]25–87 Recovery of heterogeneous population of CTCs

Up to 25 mL blood can be processed per tube
Low detection and recoveryrates
 AccuCyte [44] 81–90.5Recovery of heterogeneous population of CTCs

Allows for processing of multiple samples in parallel

Associated CyteFinder and CytePicker systems for imaging and mechanical selection of CTCs
 
Other     
DielectrophoresisApoStream [45][46] 55–78.5Recovery of heterogeneous population of CTCs

Quick processing time

iCys laser scanning cytometer for enumeration

High viability of recovered cells
 
In vivoDiagnostic leukapheresis (DLA) [47]  Recovery of heterogeneous population of CTCs

Recovery of much greater numbers of CTCs
Only a pre-enrichment step so must be used in combination with another enrichment technology

Huge leukocyte background
 GILUPI CellCollector [48]  Potential for much greater numbers recoveredMore invasive for the patient than a simple blood draw

Recovery of EpCAM+ CTCs only
CombinedCTC-iChip [49] 70–100Option for positive or negative enrichment approach

Inertial focusing provides high sensitivity selection

Quick processing time
Positive enrichment only allows for recovery of EpCAM+ CTCs

Negative enrichment will exclude CTC-WBC clusters
 LPCTC-iChip [50] 85.5–100Potential for much greater numbers recovered

Magnetic field directs WBCs to centre of channel to prevent channel clogging

Extremely high throughput
Disregards CTC-WBC clusters

Initial debulking step may result in CTC loss
 OPENchip [51] 50Chip allows for CTC enrichment and on-chip downstream molecular analysisLow throughput, low recovery rates

CTC isolation technologies, grouped based on enrichment method. Capture efficiency, recovery rate and advantages and disadvantages of the technologies are also shown.

Subcategory

Name

Capture Efficiency (%)

Recovery Rate (%)

Advantages

Disadvantages

 
 

Immunomagnetic enrichment

 

 

 

 

 

 

Immunomagnetic positive enrichment

CellSearch [3–7]

42–90

 

Semi automated

Can process up to 8 samples at a time

In device staining

CTC enumeration via CellTracks Analyser

FDA approved

Recovery of EpCAM+ CTCs only

Only able to detect CTCs expressing high levels of EpCAM

 

 

MACS [8,9]

25–90

 

Cocktail of antibodies available to increase CTC capture

Able to process up to 15 mL blood

Easy elution of CTCs

Pro Separator can process up to 6 samples at once

Recovery of EpCAM+ CTCs only

Suggested the MACS system is better suited for tissue samples

 

 

MagSweeper [10,11]

60–70

 

Nonadherent plastic sleeves allow for multiple rounds of capture to increase capture efficiency

Recovery of EpCAM+ CTCs only

 

 

Strep-tag [12,13]

79–86

70

Easy release of CTCs by simple addition of d-biotin

Possibility to use a cocktail of antibodies to increase capture

Recovery of EpCAM+ CTCs only

 

 

IMS [14]

92

 

Leukocytes repelled so high purity recoveries

Recovery of EpCAM+ CTCs only

Not yet tested on patient samples

 

Immunomagnetic negative enrichment

EasySep [15,16]

19–65

 

Recovery of heterogeneous population of CTCs

Exclusion of CTC-WBC clusters

Variable recovery rates

May inadvertantly remove CTCs

 

 

RosetteSep [17]

62.5

 

Recovery of heterogeneous population of CTCs

Cocktail of antibodies used to maximise depletion

Exclusion of CTC-WBC clusters,

May inadvertantly remove CTCs

 

Microfluidic immunocapture positive enrichment

CTC-Chip [18,19]

 

>60

Large surface area for CTC capture

High viability of recovered cells

Recovery of EpCAM+ CTCs only

Slow processing rate

Complex geometry of chip difficult to scale up

Geometry prevents passage of CTC clusters

 

 

HB-chip [20]

74.5–97

 

HB grooves increase CTC-antibody contact for increased cell capture

Recovery of EpCAM+ CTCs only

 

 

GEDI chip [21]

80–90

 

Large surface area for CTC capture

Possibility to functionalise with alternative antibodies

May miss heterogeneity of CTCs

 

 

HTMSU [22]

>97

 

Quick processing

On-chip single-cell conductometric counting for enumeration

Recovery of EpCAM+ CTCs only

 

 

Nanovelcro [23]

70–95

 

4 generations developed for different clinical utilities

3rd and 4th generation chips adapted for easy CTC release

Recovery of EpCAM+ CTCs only

 

 

Isoflux [4]

74–90

64–75

Utilises microfluidic approach to increase EpCAM sensitivity

Up to 4 samples can be processed in parallel

Multiple kits including cocktails of antibodies to capture heterogeneity

IsoFlux Cytation Imager for sample scanning

 

 

Capture enhancement by nanomaterials

NP-HBCTC-Chip [24]

79–97

 

Simple release of CTCs by addition of glutathione (GSH)

Chip surface can be functionalised with a cocktail of antibodies for enhanced capture efficiency

Recovery of EpCAM+ CTCs only

Very low throughput

 

 

GO chip [25,26]

67–100

91–95

Simple chip design

Large surface area for increased CTC capture

Recovery of EpCAM+ CTCs only

 

 

SiNP [27]

84–91

 

Large surface area for CTC capture

Recovery of EpCAM+ CTCs only

 

Capture enhancement by nanomaterials

Nanotube-CTC-chip [28]

89–100

 

Preferential adherence negates need for EpCAM antibodies

Planar enrichment surface makes chip visualisation and imaging easy

Time taken for optimal CTC adherence to substrate is too long

 

Size based enrichment

 

 

 

 

 

 

Membrane filtration

FMSA [29]

90

 

Recovery of heterogeneous population of CTCs

Cheap and easy to produce

Quick processing time

Filter clogging highly likely

 

 

ScreenCell [30]

 

74–91

Recovery of heterogeneous population of CTCs

Cheap and easy to produce

Three different devices offered depending on downstream requirements

Quick processing time

Unevenly distributed or fused pores can reduce capture efficiency

 

 

ISET [31,32]

 

83–100

Recovery of heterogeneous population of CTCs

Cheap and easy to produce

Ability to process 12 samples in parallel

Slow processing time

Blood must be diluted 1:10 to prevent membrane clogging

 

 

SB microfilter [33]

78–83

 

Recovery of heterogeneous population of CTCs

Cheap and easy to produce

Quick processing time

Only 1 mL blood can be processed at a time due to device clogging

 

 

FAST [34]

 

94–98

Recovery of heterogeneous population of CTCs

Cheap and easy to produce

Quick processing time

 

 

Microfluidics

Parsortix [35]

42–70

54–69

Recovery of heterogeneous population of CTCs

Ability to capture CTC clusters

Option for on-chip staining

Slow processing time

On-chip imaging difficult

 

 

MCA [36]

>90

68–100

Recovery of heterogeneous population of CTCs

Option for on-chip staining

Ability to process up to 4 samples in parallel

 

 

 

ClearCell FX1 [37,38]

 

52–79

Recovery of heterogeneous population of CTCs

Quick processing time

No channel clogging observed

 

 

 

Vortex VTX-1 [39,40]

 

53.8–71.6

Recovery of heterogeneous population of CTCs

Filters at channel inlet prevent channel clogging

Fully automated process

Quick processing time

Associated BioView for enumeration

Option to run in “high recovery” or “high purity” mode

 

 

 

p-MOFF [41]

 

91.6–93.75

Recovery of heterogeneous population of CTCs

Quick processing time

No channel clogging observed

RBC lysis and Ficoll density centrifugation required

 

Density based

OncoQuick [42,43]

25–87

 

Recovery of heterogeneous population of CTCs

Up to 25 mL blood can be processed per tube

Low detection and recoveryrates

 

 

AccuCyte [44]

 

81–90.5

Recovery of heterogeneous population of CTCs

Allows for processing of multiple samples in parallel

Associated CyteFinder and CytePicker systems for imaging and mechanical selection of CTCs

 

 

Other

 

 

 

 

 

 

Dielectrophoresis

ApoStream [45,46]

 

55–78.5

Recovery of heterogeneous population of CTCs

Quick processing time

iCys laser scanning cytometer for enumeration

High viability of recovered cells

 

 

In vivo

Diagnostic leukapheresis (DLA) [47]

 

 

Recovery of heterogeneous population of CTCs

Recovery of much greater numbers of CTCs

Only a pre-enrichment step so must be used in combination with another enrichment technology

Huge leukocyte background

 

 

GILUPI CellCollector [48]

  

Potential for much greater numbers recovered

More invasive for the patient than a simple blood draw

Recovery of EpCAM+ CTCs only

 

Combined

CTC-iChip [49]

 

70–100

Option for positive or negative enrichment approach

Inertial focusing provides high sensitivity selection

Quick processing time

Positive enrichment only allows for recovery of EpCAM+ CTCs

Negative enrichment will exclude CTC-WBC clusters

 

 

LPCTC-iChip [50]

 

85.5–100

Potential for much greater numbers recovered

Magnetic field directs WBCs to centre of channel to prevent channel clogging

Extremely high throughput

Disregards CTC-WBC clusters

Initial debulking step may result in CTC loss

 

 

OPENchip [51]

 

50

Chip allows for CTC enrichment and on-chip downstream molecular analysis

Low throughput, low recovery rates

 

 

 

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