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Flavonoid Biosynthesis: Comparison
Please note this is a comparison between Version 1 by Yu Peng and Version 3 by Yu Peng.

Flavonoid biosynthesis is a multi-enzyme metabolic pathway in plants that produces flavonoids, a large class of polyphenolic secondary metabolites characterized by a C6–C3–C6 carbon skeleton [1]. The pathway originates from the phenylpropanoid branch of primary metabolism, in which the amino acid phenylalanine is converted to cinnamic acid by phenylalanine ammonia-lyase (PAL), subsequently hydroxylated by cinnamate-4-hydroxylase (C4H) and activated to p-coumaroyl-CoA by 4-coumarate-CoA ligase (4CL) [2]. The committed step of flavonoid biosynthesis is catalyzed by chalcone synthase (CHS), a type III polyketide synthase that condenses p-coumaroyl-CoA with three molecules of malonyl-CoA to yield naringenin chalcone, the foundational scaffold for all flavonoid subclasses [3]. Chalcone isomerase (CHI) then catalyzes the intramolecular cyclization of chalcone to the flavanone naringenin, from which the pathway diverges into multiple branches through the action of downstream enzymes including flavonoid 3′-hydroxylase, flavonoid 3′,5′-hydroxylase, flavanone 3-hydroxylase, dihydroflavonol 4-reductase, anthocyanidin synthase, and anthocyanidin reductase. These enzymatic steps generate the eight major flavonoid branches—stilbene, aurone, flavone, isoflavone, flavonol, phlobaphene, proanthocyanidin, and anthocyanidin—each distinguished by specific hydroxylation, methylation, glycosylation, and oxidation patterns [1]. The pathway is subject to multilayered transcriptional regulation, primarily mediated by MYB–bHLH–WD40 transcription factor complexes that coordinate tissue-specific, developmental, and environmentally responsive expression of structural genes [4]. Genomic analyses have revealed that flavonoid biosynthetic genes have evolved through gene duplication and functional divergence, with enzyme families such as cytochrome P450 monooxygenases, short-chain dehydrogenases/reductases, and 2-oxoglutarate-dependent dioxygenases acquiring specialized roles in modifying the flavonoid scaffold [5].

  • Phenylpropanoid pathway
  • chalcone synthase
  • flavonoid subclasses
  • transcriptional regulation

Genomics, phytochemicals, and oxidative stress • Molecular Biology • Biochemistry, Genetics and Molecular Biology • Life Sciences

References

  1. Weixin Liu; Yi Feng; Suhang Yu; Zhengqi Fan; Xinlei Li; Jiyuan Li; Hengfu Yin; The Flavonoid Biosynthesis Network in Plants. Int. J. Mol. Sci. 2021, 22, 12824. [CrossRef]
  2. Yongxing Chen; Caiyan Liang; Yijing Liu; Min Jiang; Lin Qiu; Haizheng Yu; Lei Zhang; Chalcone synthase: from discovery to biotechnological applications. J. Exp. Bot. 2026, 77, 4321-4338. [CrossRef]
  3. Francesca Quattrocchio; Antoine Baudry; Loïc Lepiniec; Erich Grotewold. The Regulation of Flavonoid Biosynthesis; Springer Nature: Durham, NC, United States, 2006; pp. 97-122. [CrossRef]
  4. Takayuki Tohge; Leonardo Perez de Souza; Alisdair R. Fernie; Current understanding of the pathways of flavonoid biosynthesis in model and crop plants. J. Exp. Bot. 2017, 68, 4013-4028. [CrossRef]
  5. Mehran Dastmalchi; Elusive partners: a review of the auxiliary proteins guiding metabolic flux in flavonoid biosynthesis. Plant J. 2021, 108, 314-329. [CrossRef]
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